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PLM1_60_b1_redo_sep16_scaffold_286_25

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(20566..21105)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Amycolatopsis alba RepID=UPI00037D4D46 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 178.0
  • Bit_score: 282
  • Evalue 1.80e-73
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFZ79631.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 178.0
  • Bit_score: 284
  • Evalue 8.50e-74
Conserved putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 178.0
  • Bit_score: 283
  • Evalue 2.20e-74

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Taxonomy

Amycolatopsis sp. MJM2582 → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGACCTCGGCGGATGAGGAGGAGCTGGTCCGGCGCACCGCGCGTGGCGACCAGGCAGCCTTCGGCGAGCTGTACCGGCGCACGTCGCCGTGGCTCGCCGTGCGGTTGCGCCGCCGCTGCTCCGACGACGACGTGGTCGCCGAGGTGATGCAGGAGACGTACCTGGCGGTGTGGCGCGCGGCGGACGCCTTCGCCGGCGCGAGCGTCGGCGGCAGCGCGGTCGGCTGGCTCTGGACCATCGCCGCGCGCCGCCTGATCGACGCGTTCCGGCGGCGGGCCCGGCTGGCACAGGTGCCCCCAGCGGCTGCGCTGGCGGAGACGGTCCCGGGCGCTGAGGACGAGGCGCTCGGCCGGCTGGTCGGCGACGACCTGGGCGACGCGTTGCGCCGGCTCGCGCCCGAGCTACGGCAGGTACTGCAGGCGACGGTGCTCGACGGGCTGACCGTGCGGGAGACCGCCGTGCTGCTCGGAGTGCCGGAGGGAACGGTCAAGACGCGTGCCCGCCGGGCGCGCGTCGCGCTACGGGAGGCGCTGTCATGA
PROTEIN sequence
Length: 180
VTSADEEELVRRTARGDQAAFGELYRRTSPWLAVRLRRRCSDDDVVAEVMQETYLAVWRAADAFAGASVGGSAVGWLWTIAARRLIDAFRRRARLAQVPPAAALAETVPGAEDEALGRLVGDDLGDALRRLAPELRQVLQATVLDGLTVRETAVLLGVPEGTVKTRARRARVALREALS*