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PLM1_60_b1_redo_sep16_scaffold_1519_14

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(11775..13022)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF25_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 410.0
  • Bit_score: 624
  • Evalue 5.70e-176
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK37888.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 413.0
  • Bit_score: 625
  • Evalue 2.70e-176
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 410.0
  • Bit_score: 624
  • Evalue 1.60e-176

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
GTGACGACGCACTCCGGAGCCGAGGACCTGCTGCGCGCGCTGGCGCCGCAGGTCCTCGGCGCGCTCGTCCGGCGGTACGGGCACTTCGACGCGTGCGAGGACGCCGTACAGGAGGCGCTGCTCGCCGCCGCCGTCCAGTGGCCTGAGCAGGGGATACCGGACAACCCGCGGGGCTGGCTGATCACGGTGGCGTCGCGCCGGTTGACCGACGAGCTGCGCAGCGAGTACGCCCGCCGGCGCCGCGAGGACACAGCCCTGGCGATGACTCCGCTCGACCAGTTCGTCGCGCCCGCTCCGGGCGACGAGTATCCGCAGGCCGAGGACGACACGCTGACGCTGCTGTTCCTGTGCTGCCATCCCGCGCTGTCACCCTCCTCCCAGGTCGCATTGACGCTACGCGCCGTCGGCGGCCTGACCACGGCGCAGATCGCGCGGGCCTTCCTCGTCCCCGAGTCGACCATGGGGCAACGCATCAGCCGGGCGAAGCAGCGCATCAAGGCCACCGGCATCCCGTTCCAGCTGCCGCCGGAGCCGGAACGGACGGACCGGCTCGACGCGGTCCTGCACGTGCTGTACCTGATCTTCAACGAGGGCTACACGACCAGCTCCGGCCCCGACCTGCACCGCGCCGAGCTGACCGGCGAGGCGATCCGGCTCACCCGCGGCCTGCACCGGCTGCTACCGGATGACGGCGAGGTGGCCGGCCTGCTCGCGCTCATGGTGCTCACCGACGCCCGGCGTCCGGCCCGTACGCGTGCGGACGGCGGCCTCGTGCCGCTCGCCGAGCAGGACCGCACGCTGTGGCAGTCCGGGTCCATTGAGGAGGGCGTCGCGCTGATCACCCGCACGCTGGCCCGAGCCCCGCTCGGCCCGTACCAGATCCAGGCGGCCATCGCCGCGGTACACGGCGAGGCAGCGCGGGCCGAGGATACGGACTGGCCGCAGATCGTCGCCCTGTACCGGGTACTCGCGCGCATCTCGCCCGGTCCGATGGTCACGCTCAACCACGCCATCGCCGTCGCCATGGCGCAGGGCCCGCAGGCCGGGTTGGACATGCTCGCGACGCTGGACGCCGACGACCGGCTGGCCGAACACCACCGGCTCGACGCGGTCCGCGCGCACCTGCTGGAGATGGCCGGCGATCGAGCGGCGGCCCGTGCCGGCTACCAGCGCGCCGCCCGCCGCACGACTAGCCTCCCTGAACAGCGTTACCTGGAGGCCCGCGCCGCGCGGCTCGCGGAGCCGTGA
PROTEIN sequence
Length: 416
VTTHSGAEDLLRALAPQVLGALVRRYGHFDACEDAVQEALLAAAVQWPEQGIPDNPRGWLITVASRRLTDELRSEYARRRREDTALAMTPLDQFVAPAPGDEYPQAEDDTLTLLFLCCHPALSPSSQVALTLRAVGGLTTAQIARAFLVPESTMGQRISRAKQRIKATGIPFQLPPEPERTDRLDAVLHVLYLIFNEGYTTSSGPDLHRAELTGEAIRLTRGLHRLLPDDGEVAGLLALMVLTDARRPARTRADGGLVPLAEQDRTLWQSGSIEEGVALITRTLARAPLGPYQIQAAIAAVHGEAARAEDTDWPQIVALYRVLARISPGPMVTLNHAIAVAMAQGPQAGLDMLATLDADDRLAEHHRLDAVRAHLLEMAGDRAAARAGYQRAARRTTSLPEQRYLEARAARLAEP*