ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1547_15

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(13622..14326)

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical membrane protein Tax=Rhodococcus opacus (strain B4) RepID=C1AT58_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 205.0
  • Bit_score: 233
  • Evalue 1.60e-58
Membrane protein {ECO:0000313|EMBL:KDE14046.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 196.0
  • Bit_score: 236
  • Evalue 3.50e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 205.0
  • Bit_score: 233
  • Evalue 4.50e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus sp. BCP1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAAGGCTATGCATACTGCGCAGCGGCACAGCCAAGACCCGGTCGGCGGCGATCTCCAGAACCGACCAGTTCCTTTCGCCGCGCTGCTGGCATGGGCGGGGATCATCGGTCCGGTTCTCTTCACCGCGACGTTCCTGGCTCAAGAGGCCTTCCGCATGGAGGAGTACAGCCCGCTCGCGGAGCCGGTCAGCGCGCTGGAAGCCGGCCCCAACGGGTGGATTCAGCAGGTGAACTTCGTCGTCTTCGGCGTCCTGACGATGGCTTTCGCGGTCGGACTCCATCTCGGCGTGCGGCCGACCCGGACGGGCATCGCCGGGCCTGCTGCCCTGTTCGTGAGCGGTATCGGGTTGCTGCTCGCTGCGATCTTCCCGCTTAGGGAGGACGCTGCCGGCGTCACCTACGACCCGGGCGGTCACTTCGTCGCCGGCGTCGTGTTCTTCCTGACCAGCGCGGTCGGGCTGATCGCCGTGTCCCGCCGGTTGGCACGTGACCCGCGGTGGCGGAGCCTCGCCACCTACACGCTCACGGCTGGCGCGGTGGCTCTTGCCGGGTTCGTCGTCCTGGGCACCCTCGTGATGCCGGATGACGCCCCGCTGCACGACTGGGCCGGTCTGGCTCAGCGCGCGCTCATCATCATCGTGCTGTTCCCCTGCCGGATCGTCCTCTCGCTCCGGTTGCTGCTGGTCGCGAGTGGGCGGCGATGA
PROTEIN sequence
Length: 235
MKAMHTAQRHSQDPVGGDLQNRPVPFAALLAWAGIIGPVLFTATFLAQEAFRMEEYSPLAEPVSALEAGPNGWIQQVNFVVFGVLTMAFAVGLHLGVRPTRTGIAGPAALFVSGIGLLLAAIFPLREDAAGVTYDPGGHFVAGVVFFLTSAVGLIAVSRRLARDPRWRSLATYTLTAGAVALAGFVVLGTLVMPDDAPLHDWAGLAQRALIIIVLFPCRIVLSLRLLLVASGRR*