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PLM1_60_b1_redo_sep16_scaffold_2251_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 833..1387

Top 3 Functional Annotations

Value Algorithm Source
Sigma subunit sigma24 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9R1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 173.0
  • Bit_score: 224
  • Evalue 4.50e-56
ECF subfamily RNA polymerase sigma-24 similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 173.0
  • Bit_score: 222
  • Evalue 8.20e-56
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG89992.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 173.0
  • Bit_score: 222
  • Evalue 4.10e-55

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGACCGATCCGGGTCCGGACACGGAGGAACTGGCCCGGCGCGCCTCGGCCGGCGACGGGCCGGCCCTGGACGAGCTGCTGCGCAAGATCGAGCCAGGCGTGCTGCGGCATTGCGCCCGCTTCCTGCCGTACCGGCAGGACGCCGAAGAGGCGTGTCAGGACGTGCTGCTGAAGGTGGCGACGAGGATCAACACGTTCGAGGGCCGATCCACGTTCTCAGCCTGGCTCTACGCGGTAACCGCGAACCAGGCCCGGCAGACCTACCGCACGCTGCGTCGCCGATTCGCCGAGCGCAGTACTGACCTGCCGATCGAGCGGCCGGACCCACGGACCACCAGCGTCATCGCCGGCTCCCGGCTAGACCTGCTGGACGCGCTGGAACGGCTGGAGGCCGAGCACCCCGAGCTGATCTCGGCGTTCGTACTGCGGGACCTGTCCGACCTGGAATACGCGGACATCGCTCGGTACCTCGACGTCCCGGTGGGCACCGTGAAGGCGCGCATCCACCACGCTCGACGCTACGTCCGCGCGTCCCTGGCTGGCGGCGCCGACTAA
PROTEIN sequence
Length: 185
VTDPGPDTEELARRASAGDGPALDELLRKIEPGVLRHCARFLPYRQDAEEACQDVLLKVATRINTFEGRSTFSAWLYAVTANQARQTYRTLRRRFAERSTDLPIERPDPRTTSVIAGSRLDLLDALERLEAEHPELISAFVLRDLSDLEYADIARYLDVPVGTVKARIHHARRYVRASLAGGAD*