ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2537_6

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 3441..4307

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Streptomyces RepID=UPI00020007EE similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 286.0
  • Bit_score: 296
  • Evalue 1.90e-77
DNA-binding protein {ECO:0000313|EMBL:KJK57460.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 287.0
  • Bit_score: 293
  • Evalue 2.20e-76
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 286.0
  • Bit_score: 202
  • Evalue 1.40e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 867
GTGGTCACCCGCCGGGCGCCGCTCACCGAGGATGTGGACGCGGCAGCCAGGGCGACGTACCGGCTGGATGCGCAGCTCGAACAGCACGCGCGCGACGCAGCCTGGCTGGTTTCCGCTGGCTACCTCGCTCCGCCTCCGCCGTTCCCAACGGTCCACCGCGTCGCGAGCCGCGAGGAAGCTGCGGCACTCGCCCGCAGAGCGCGCAGGTCGATCGGCCAGGAGAGCGGCCCGCTCGGCCCGATGGCCGACATCGCGGAACAGTTCGGCTTGTACTTAGCCGTGATCGACGCCGACGTCGAAGGCGCTTCACTCTGGACGGACGGGTACGGCGTCGCATTGCTCGGCGGGGCAGCCGAACCCGGCCGCCGCCGGTTCACCGCGGCACACGAACTCGGCCACCACCTCTTGCAGGACGCCTACCACAGTGACGTGGGGATAGCCGCCAGCCGAGATGAGCGCGAAGGGCTCATCGACGCCTTCGCCAGCGAGTTCCTGCTTCCTTCCGCTGATCTACGCAGCGTGATAGCCGCCGAACGCACCTGGGACAGGGCCGCGCTCGTCCAGCTGTCCGGTGAGTACCGCGTGTCCTGGTCCGTGGCGCTCGCGTCGGCACAGAGGGCTGCGCTCATCACGAGCGACGAACTTGATCGGCTCCGCGCCGACCAGCCGCTCCGCGGCGACTTCGTCCGCATCGTCGGCCGCGAGCCACTCCCCGACCTCACGCCGGGAACCACCGGCGCAGCGTGGAAGCGTGCGGTCCTACACGCCTACGAGGACGGCGCCATCACCAGGGAACGCGCCGTGGAGCTACTCCGAGGAGCGCTGTCCGTCCAGGATCTGCCGTCCCCGGATGGCCGAGCGTGGTAG
PROTEIN sequence
Length: 289
VVTRRAPLTEDVDAAARATYRLDAQLEQHARDAAWLVSAGYLAPPPPFPTVHRVASREEAAALARRARRSIGQESGPLGPMADIAEQFGLYLAVIDADVEGASLWTDGYGVALLGGAAEPGRRRFTAAHELGHHLLQDAYHSDVGIAASRDEREGLIDAFASEFLLPSADLRSVIAAERTWDRAALVQLSGEYRVSWSVALASAQRAALITSDELDRLRADQPLRGDFVRIVGREPLPDLTPGTTGAAWKRAVLHAYEDGAITRERAVELLRGALSVQDLPSPDGRAW*