ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2552_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(1834..3405)

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein Tax=Mycobacterium smegmatis MKD8 RepID=L8F6Z0_MYCSM similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 514.0
  • Bit_score: 830
  • Evalue 8.60e-238
Radical SAM protein {ECO:0000313|EMBL:ETK34823.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 516.0
  • Bit_score: 846
  • Evalue 1.20e-242
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 514.0
  • Bit_score: 826
  • Evalue 3.50e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
GTGACCGAGCCGTCTGACGGTGCCCCGCTGCGGGGTGACCGCATTCACCGGTACGTCGTCGCCTTCTGCCCGCGATGCCACGACGAGCGGCCGGACCGTCCGCTGGCGGAGGTACGGCGCCTCTCCGGCTGGCTCGCCGAGCGGGACGGCCGGATCTGGCTGGAGCGTGGCTGCCCCGATCACGGGCTGGTCCGCACGCTCTACGACGAGGTCCCGGAGATCCTCGGGTACCTGGAGGAATGGACCGCGCCGACGAAGGCGCACACGCCCGACATGGCCGGCAACTACGCGCCCGTCCCGCAGGTCTACCTGGACGGCCTGGGCGAGATGCAGACCCAGCACACCTGCATCCTGCTGGCCGACATCGTCGAGGCATGCAACCTGCGATGCCCGACCTGCTTCACCGACTCTTCGCCGGATCTGCGTGGCGTCGTGCCGCTCGTCGACATCCTCGCCAATCTGGACCAGCGACTCGCACGGGAGAACGGGCGCATCGACGTCCTGATGCTCTCCGGCGGCGAGCCCACGCTCTATCCGGACTTGCCCGAGCTGCTCGCCGAGGTGGCCCAGCGCAACGTGGTCCGCGTGCTGATCAACACCAACGGCGTGCGGATCGCCCGGGACGACGCCCTGCTCGATCTGCTGACCCGGCACCGTGAGCGGGTCGAGGTGTACCTCCAGTTCGACGGCTCATCGGCCGAATCGAGCCGGCACCATCGCGGCGCCGACCTACGCCGGATCAAGGACGCGGCGCTGGAGCGGCTCTCGTCCCGGGAGATCTTCACGACGCTGACGATGACCGCTGCCCTGGGCGTCAACGACGGTGAGATCGGCGACGTGCTGCGGCGCGCGCTCGACACCCCGTACGTCGGCGGCGTGAGCATCCAGCCGCAGTTCTCGTCCGGCCGCTCGGGCGCGATCGATCCGCTCGACCGGCTCACGCACACCGGCGTGCTCGCCCGGCTCGGACCGCAGACCTCGGACCTGGTGACCTGGCGGGATCTCACCGCGTTGCCGTGCAGCCACCCGCACTGCTGTTCGGTCGGGTACCTGCTCCGGGACGACGCGGGGGACTGGCGGTCACTGGTGGCGCTCATCGGCCCGGACCGGCTGAAGGACAACCTCGGGCTGGTCAGCAACCGGATCGCCGACCGCGCCATCCCTGCCGAGCTGCGCGCCGCTGTCAAGGAGTCGCTGCTAGGGCTGCTCTCGGAGCAATCCTCATTGTCGCATCCGCGGATCGGCGAGCTGTGGCGGAACATCTGCGAGAACTGCGACCTGGGTGTGGCGACGCTGCTCGCGCTCGCGGCGTCGGCGCTGCCGGGGCGCCGGGCGAAGTTGCGGCGGCTCCTCGGCGAGCGGGTCGTGCGCATCACCGTGAAGCCGTTCATGGACATGAGCACGATGATCGAGGAGCGGCTCACCCAGTGCTGCGTCCACGTCGGCACGCGGAGCGAGCGGCAGGACCAGTGCGCGCCGTTCTGCGCGGTCCAGGCGTGGCCGGCGCTGGGGGCGCAGCGGCTGTCCGTGGCGGCCGGCACGCGGATGCTGGCGCCTGTGGACGTGCTGTGA
PROTEIN sequence
Length: 524
VTEPSDGAPLRGDRIHRYVVAFCPRCHDERPDRPLAEVRRLSGWLAERDGRIWLERGCPDHGLVRTLYDEVPEILGYLEEWTAPTKAHTPDMAGNYAPVPQVYLDGLGEMQTQHTCILLADIVEACNLRCPTCFTDSSPDLRGVVPLVDILANLDQRLARENGRIDVLMLSGGEPTLYPDLPELLAEVAQRNVVRVLINTNGVRIARDDALLDLLTRHRERVEVYLQFDGSSAESSRHHRGADLRRIKDAALERLSSREIFTTLTMTAALGVNDGEIGDVLRRALDTPYVGGVSIQPQFSSGRSGAIDPLDRLTHTGVLARLGPQTSDLVTWRDLTALPCSHPHCCSVGYLLRDDAGDWRSLVALIGPDRLKDNLGLVSNRIADRAIPAELRAAVKESLLGLLSEQSSLSHPRIGELWRNICENCDLGVATLLALAASALPGRRAKLRRLLGERVVRITVKPFMDMSTMIEERLTQCCVHVGTRSERQDQCAPFCAVQAWPALGAQRLSVAAGTRMLAPVDVL*