ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_4566_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(6488..7477)

Top 3 Functional Annotations

Value Algorithm Source
Probable integrase Tax=Rhizobium loti RepID=M5AMY5_RHILI similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 329.0
  • Bit_score: 430
  • Evalue 9.60e-118
Integrase {ECO:0000313|EMBL:KKC01555.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 329.0
  • Bit_score: 447
  • Evalue 1.40e-122
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 329.0
  • Bit_score: 407
  • Evalue 1.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium nebraskense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGACCGCGATCGCTCCGACCCTGCAATCATTCTTCACCGACCATCTGAGACACCAGCGCCACGCCAGCGGCCACACGGTCGCCGCCTACCGCGACTCCTGGAAGCTCCTGCTCGGCTTTGCCCAACAGACAACCGGCAAGAGCCCCTCCCAGATCCTGTTCGCCGACCTCGACGCGCCGCTCGTCGGCGCATTCCTCGATCACCTGGAGCACCAGCGCGGCAACGCCGCCCGCACCCGTAATGCTCGCCTGGCAGCGATCCATTCGCTGTTTCGCTACGCGGCGCTGCGCCATCCCGAAGACGCCGCCGTCATCGCCAGGGTGCTGGCGGTGCCACCCAAACGATTCAGCCATAACGTGATCACCTACCTGACCAGGGAGGAGATCGCCGCTCTGCTTGCAGCACCAAACCAGACCACCTGGACCGGCCGACGCGACCACGCCATGCTGGCGCTCGCGGCCCAGACCGGCCTGCGGGTCTCCGAACTCACAGGGCTGACCGTCGCGGACGTCCACCCGGGTGCCGGCCCGCACGTCAGCTGTCACGGCAAGGGCCGCAAGCAGCGCATCACGCCCCTGACCCCCGCGACCGTCGGCGTGCTGCACGCCTGGCTCGTCGAGCGCGCCGCCTCGTCAGCCGAGCCGCTGTTTCCCACCCGTCGCGGCACCGCGCTGACCCGCGACGCGGTCGAGCGCCGCCTGGCCGTTTACGTCAGCGCAGCCGCGGCCCACTGCGCGTCACTGGCCGGCAAGAAGGTCACCCCGCACGTCCTCCGGCACTCCGCAGCCATGAACCTGCTCGCCGCAGGAGTGGACACCACCGTGATTGCTTTGTGGCTCGGGCACGAAAACGTCGCTACCACGCAGATCTATATCCACGCCGACCTCGCGCTCAAGGAGCAAGCCCTCGCCAGAACGGCGCCCGGCAACGTCAAACCCGGCCGTTACCAGCCGCCCGACCAGATCCTCGCCTTCCTCGAAAGTCTCTGA
PROTEIN sequence
Length: 330
MTAIAPTLQSFFTDHLRHQRHASGHTVAAYRDSWKLLLGFAQQTTGKSPSQILFADLDAPLVGAFLDHLEHQRGNAARTRNARLAAIHSLFRYAALRHPEDAAVIARVLAVPPKRFSHNVITYLTREEIAALLAAPNQTTWTGRRDHAMLALAAQTGLRVSELTGLTVADVHPGAGPHVSCHGKGRKQRITPLTPATVGVLHAWLVERAASSAEPLFPTRRGTALTRDAVERRLAVYVSAAAAHCASLAGKKVTPHVLRHSAAMNLLAAGVDTTVIALWLGHENVATTQIYIHADLALKEQALARTAPGNVKPGRYQPPDQILAFLESL*