ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_5172_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(6088..6423)

Top 3 Functional Annotations

Value Algorithm Source
Transposase Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PHI6_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 109.0
  • Bit_score: 157
  • Evalue 5.30e-36
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:EUA31609.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 2285 (S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 109.0
  • Bit_score: 157
  • Evalue 7.40e-36
transposase, IS110 family similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 111.0
  • Bit_score: 145
  • Evalue 5.90e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium avium → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 336
TTGGAGGCCACCGGGAACACCTGGGCGATCGCGACGCTGCTTGCCAGCCGGGCCGGGCGGGTAGTCGTGTCGAACCCGGCCAAGACCCGAGCGATCGCCGAGGCGAAGGTGAAGACCGACAAGGTCGACACGCAGATTCTGGCGCAGCTGCTGGCCGCGGACTATCTGCCCGCGGTGTGGCTACCGGACGCGGCCACCAATGCGCTGCGCCGGCAGGTGATTCGTCGGGCCGGCCTGGTCCGGCAACGCACTCGGTGCAAGAACCAGGTGCACGCGATCTTGCATCGCAACCTGGTGCCGCGGTGCCCGGCGGCGGACCTGTTCGGCCACAAATGA
PROTEIN sequence
Length: 112
LEATGNTWAIATLLASRAGRVVVSNPAKTRAIAEAKVKTDKVDTQILAQLLAADYLPAVWLPDAATNALRRQVIRRAGLVRQRTRCKNQVHAILHRNLVPRCPAADLFGHK*