ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_7055_1

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 301..1515

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase/recombinase Tax=Leifsonia rubra CMS 76R RepID=S7VYP2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 403.0
  • Bit_score: 442
  • Evalue 3.00e-121
Phage integrase family protein {ECO:0000313|EMBL:EUA08606.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 404.0
  • Bit_score: 460
  • Evalue 1.90e-126
Putative integrase/recombinase y4rA similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 391.0
  • Bit_score: 304
  • Evalue 3.60e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium kansasii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGAACAGCCCAACGAGCAAGGTCGCCGAGGTGCGGGTGCCCGGCCCGCTCGCGCCGTTCGCATCGGCATTCCGGGAGGCGCTATCAGCGGCGGGATACACGCCGTTGTCGGCCGTCAACCAGCTCAGACTGATGACCCACCTCAGCAGGTGGCTCGATGCCCGCGGGCTGGCGGCCGCCGACCTGACCGACGAACGCGTGGAGCAGTACCTGGCTGAGAGATGCGCTGCCGGCTATACCGGGCTGATCAGTCGCCGTGCCATGGACCCGATCCTCAACGTTCTGACCGCGTCTGGTGTCCGGCCGGCCTCCGAACAGGCCCCACCCGATCCGGGGGCACCTGCGCTGCTGACGGCGTTCGACCGGTATCTGCACGCGGAACGAGGGCTGGCCGCCTCCACGACGACGGCGTATGTCGCTCGCGCCGCCCGGTTCCTGGCCGACCACGCCGCCGCCGGCGAGGTCTGCGAGTTGACCTCCGCTGACGTGACATCTGCGGTGCTGGCCGAGTGCACGGCCCGCTCGGTCGGGGCTGGGCAGTACTTCGTGGCGGCCCTGCGCGCGTTCCTACGCTTCGCCCACGTCGAAGGCCTCATCGCCGCCGACTTGTCGGCGGCGGCGCTGACGGTGACCGGGCGGCGGGGCTCGCTGCTGCCCAAGGGGATCAGCCCGGATGATGCGGAGGCGCTGCTGCGCGCCTGCGACCGGAGCACAGCGGTCGGCCGGCGTGACCGGGCTGTGCTGCTGATCCTGCTGCGGCTGGGACTTCGCGGCGGGGAGGTGGCCAGGCTGCGGCTGGAGGACATCGACTGGCGGGCCGGACAGCTGCTGGTGAGGGGCAAGGGACGCCGTGACGAACAGCTTCCCCTTCCCTGCGATGTCGGCGAAGCCCTCGCCGACTACCTGCAGCAGGACCGGGCGGCCACGGCCCGGCGGGAGGTGTTCGTGACCGCCATCGCGCCGGCGGTGGCCCTGACTCGGGAGGCGGTGTCCGGGATCGTGCGTCGCGCCTGCGGCCGAGCGGGAATCGCTCAGATCGGACCGCACCGGCTGCGCCACGGCCTGGCCTGCGCCATGGTCCGTGCCGAGGTGCCGCTGGCTGAGATCGGCCAGGTGCTGCGGCATCGCAGCCCGGTCTCCACCGCTATCTATGCGCGAGTGGACGTAGCTGCGCTGCGCGATCTGGCCCAGCCCTGGCCGGCGGGAAGCTGCTGA
PROTEIN sequence
Length: 405
MNSPTSKVAEVRVPGPLAPFASAFREALSAAGYTPLSAVNQLRLMTHLSRWLDARGLAAADLTDERVEQYLAERCAAGYTGLISRRAMDPILNVLTASGVRPASEQAPPDPGAPALLTAFDRYLHAERGLAASTTTAYVARAARFLADHAAAGEVCELTSADVTSAVLAECTARSVGAGQYFVAALRAFLRFAHVEGLIAADLSAAALTVTGRRGSLLPKGISPDDAEALLRACDRSTAVGRRDRAVLLILLRLGLRGGEVARLRLEDIDWRAGQLLVRGKGRRDEQLPLPCDVGEALADYLQQDRAATARREVFVTAIAPAVALTREAVSGIVRRACGRAGIAQIGPHRLRHGLACAMVRAEVPLAEIGQVLRHRSPVSTAIYARVDVAALRDLAQPWPAGSC*