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PLM1_60_b1_redo_sep16_scaffold_7612_1

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(2..370)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6H2W4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 114.0
  • Bit_score: 102
  • Evalue 2.90e-19
Uncharacterized protein {ECO:0000313|EMBL:EFC81496.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 74.0
  • Bit_score: 91
  • Evalue 7.20e-16
putative transposase similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 76.0
  • Bit_score: 89
  • Evalue 5.50e-16

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCGCGTGATCCGGTCTGGGTGAGGTCGACGCCGGGGCGTGTGGTGGAGGAACTGCTGCCTCGTGCCCGGCATGACACGGCGCGGTACGCCAATAACCGCGTCGGGGCCGATCACGGGCAGCTGAAACGCCGGCTGCGGCCGATGCGCGGGTTGAAGTCCGATCTCGGCGCCAGAACGGTCATCACCGGGCACGCTTTCGTCCAGAACATCCGCCGCGGATTCTACGAACTGGCCATCGACGAACCGGTCCAGCTACGGTCGCGGTCGCCTTCACCGAGCTCACGCACGCCATCTGAACCGGGACTCCGAGCCGGTCCGGCACGTCCAACGATCAAACAACGCACTCTCACTCGCCGGCGGCCCAGC
PROTEIN sequence
Length: 123
VARDPVWVRSTPGRVVEELLPRARHDTARYANNRVGADHGQLKRRLRPMRGLKSDLGARTVITGHAFVQNIRRGFYELAIDEPVQLRSRSPSPSSRTPSEPGLRAGPARPTIKQRTLTRRRPS