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PLM1_60_b1_redo_sep16_scaffold_7652_6

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 3501..4439

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Actinopolymorpha alba RepID=UPI0003613330 similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 310.0
  • Bit_score: 531
  • Evalue 4.90e-148
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 312.0
  • Bit_score: 517
  • Evalue 2.10e-144
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ87690.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 312.0
  • Bit_score: 517
  • Evalue 1.00e-143

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCACCCAATCCGAGCCAGGAGACGGCCGGCTCGATCCGAGCCTGAGCGCGATCATGAGCGAGCGGCGTCAGCTGATCAACCTCGCGTACCGACTCCTCGGCTCCCTGGCCGATGCTGAGGATGCCGTACAAGAGACCTACGCCCGCTGGTACGCCATGTCCCGGCAGCAGCAGGAAGCCATCGAATCCCCCGGCGCCTGGCTGACGAAGGTCGCCAGCCGCATCTGCCTCGACCTGCTCGGCTCGGCACGGGCCCGGCGGGAGCGCTACGTGGGCGAATGGATCCCGGAGCCGCTGCCCGATCGTACGGAGTGGATCAACGGGCGGTCGGGCGGCACCACCGTCGACCCGGCCGACCGAGTCACCCTTGACGAGTCGATCAACATGGCCTTCCTCGTCGTGCTCGAATCGATGACCCCGGCCGAGCGCGTCGCGTTCATCCTTCACGATGTCTTCCGCTACGCCTTCGGCGAAGTGGCCGAGATCGTCGGCCGTACGCCGGCGGCATGCCGCCAGCTGGCCTCCTCAGCCCGCCGCCGCATTCGCGCGTCGCAGGCTCCCGCGACGCCGACAGCCCAGCGCGCCGACATCGTCAGGGACTTCAAACAGGCATGGGAAGCCAAGGACATCGACGCCCTCATCGGCCTCCTCGACCCCGACGCCACGGCGATCGGCGACGGCGGCGGCCTCGTCAGCGCCGAGCTCCGCCCCATCGAAGGCGGCGAGCAGATCGCGCGCTACTTCGCCGATCTCGCCGGCCGGGCACCCAGCAACGTGACTCTCCTGGAGCGTACGGTCAACGGTCAGCCCGGCCTGGTGGCTCAGCAAGACGGCGTCACCGTGACGGTGTTCGCGTTCGACGTCGCAGGCGACCGGATCAAGCACATCTGGGCAGTACGCAACCCCGACAAGCTCCGGCCCTGGACGGCCGGCTGA
PROTEIN sequence
Length: 313
MSTQSEPGDGRLDPSLSAIMSERRQLINLAYRLLGSLADAEDAVQETYARWYAMSRQQQEAIESPGAWLTKVASRICLDLLGSARARRERYVGEWIPEPLPDRTEWINGRSGGTTVDPADRVTLDESINMAFLVVLESMTPAERVAFILHDVFRYAFGEVAEIVGRTPAACRQLASSARRRIRASQAPATPTAQRADIVRDFKQAWEAKDIDALIGLLDPDATAIGDGGGLVSAELRPIEGGEQIARYFADLAGRAPSNVTLLERTVNGQPGLVAQQDGVTVTVFAFDVAGDRIKHIWAVRNPDKLRPWTAG*