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PLM1_60_b1_redo_sep16_scaffold_10010_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3809..5551)

Top 3 Functional Annotations

Value Algorithm Source
Rhs element Vgr protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH89_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 588.0
  • Bit_score: 484
  • Evalue 9.80e-134
Rhs element Vgr protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 588.0
  • Bit_score: 484
  • Evalue 2.80e-134
Rhs element Vgr protein {ECO:0000313|EMBL:ACV78295.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 588.0
  • Bit_score: 484
  • Evalue 1.40e-133

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGCTTAGCCCGCACCGGCATGGCACCCGCCCCGAGGTGCTGGTCGACGGCACGCCGCTGCGGGACGACGTCCTGGCGCTCGTGGAGCGGGTCGTCGTGGACTGCTCGGTGCACCTTGCCGACATGGTCGAGATCTGGTTCCGCGACGGCGCCCGCGACGCGCTGACCCGGGCGGGGATCAAGATCGGCAGCGCCGTCACGGTTTCGACGACGCGGGCCGGCGACGGCGCCCAGACGGCGCTCGTGCAGGCCGAAGTGACCGCGCTGGAGTGCGAGTTCGACGAGCTGGGCACCCGTGCGGTCGCCCGCGGCTACGACCACGCGCACCGGCTGTCCCGGGGCCGCCGGACCCACTCATACAACGACGTCACCGACGCGGACATCGTGCGGACCGTGGCAGGCCGCGCCGGGCTGTCCACGGGGGACGTCGCCAGCGGCGGCCCGGTGCACGAGCACGTCGCGCAGCTCAACTGCACAGACTGGGAGTTCCTACTGGCCCGCAGCCGGGAGACCGGTCACGAGGTGGCGGTGCTCGACGGGAAGGTGCACTGGCGGAAGCCGGCGCCGTCGGCGGACGCGCCGGAAGCCGCGCCCGATCTGATCTCCCGGCAGGCTCGCCAGCTCGTGCTGGGCACCAACCTGCTGCGGTTCCGTCCCCGGGTCACCGCGGCGGCGCAGGTGGGTGAGGTGGAGGTACGGGGTTGGGATCCGCAGCGCAAGGAAGCCGTGGTCGGCCGGTGCCAGGCCACCACGACGAGCGCGGCGGTCGGACTCGATCCCGCCGGGCTGGCAGCCATCTTCGACGCACCGCCGCACGTGGCCGTCGACCGGCCACTCTCGACCCAGGGTGAGGCGGACGCCGCCGCAGCCGCACTCGCCGAGACCCTGGCCAGCGCGCACGCCGAAGCAGAGGGCATGGCGCACGGCGATCCGCAGCTCACTCCGGGCGCCGCCGTCTCGGTCAGCGGCGCCGGCGCGCCGTTCGACGGCACCTACACCGTGACCGCGACACGCCATCTCATCGACGACCGTGGTTACCGCACCGAGTTCGTGGTCAGCGGCCGGGCGGAGCGCTCGCTGCTGGGGTTGGCGTCCGGGGGTGCCACCAACGGCGTGCACTCCGCGGGCGGGCCGCCGGTGTACGGGGTGGTCATCGCGCAGGTCACCGATGTCAACGATCCGGACGACCTGGGCCGGGTGAAGCTCACGTTCCCGTGGCTGTCGGAGGAGTACGAGTCGTGGTGGGCGCGCGTCGCCCAGCTCGGCGCCGGCCCGCAGCGCGGGGCGGTGTGGCTGCCCGAGGTGAACGACGAGGTGCTGGTCGCGTTCGAGCACGGCGACACCCGGCGCCCGTACGTGGTGGGCCAGCTCTACAACGGCGTGGACACCCCGCATCTCGGCGACGGGCTGATCGACGGCGGTTCCGGAGCGGTGAAGCGGCGCGGGTTCGTCTCGAAGCAGGGGCACCGGCTGGTCTTCCTCGACGACGACGCGAAGAGCGGCGTGGCCGTGATGTCCGCCGACGACTCGCTGAAGATCTCGCTCAACCAGACCGCCACGACGATCAAGATCGCCGCCGACGGCAGCGTCGAGATCCGTGGATCGCAGCAGGTCACGGTCGCCAGCGACGGTGCCGTGAGCATCCAGGCCGGCACGACGTTGGAGCTGAAGGGGAACTCCGGCGTGACCATCGACGGCGGCCCGCAGGTCGGCGTCACCGGCAGCGTCATCAAGCTGAACTAG
PROTEIN sequence
Length: 581
MLSPHRHGTRPEVLVDGTPLRDDVLALVERVVVDCSVHLADMVEIWFRDGARDALTRAGIKIGSAVTVSTTRAGDGAQTALVQAEVTALECEFDELGTRAVARGYDHAHRLSRGRRTHSYNDVTDADIVRTVAGRAGLSTGDVASGGPVHEHVAQLNCTDWEFLLARSRETGHEVAVLDGKVHWRKPAPSADAPEAAPDLISRQARQLVLGTNLLRFRPRVTAAAQVGEVEVRGWDPQRKEAVVGRCQATTTSAAVGLDPAGLAAIFDAPPHVAVDRPLSTQGEADAAAAALAETLASAHAEAEGMAHGDPQLTPGAAVSVSGAGAPFDGTYTVTATRHLIDDRGYRTEFVVSGRAERSLLGLASGGATNGVHSAGGPPVYGVVIAQVTDVNDPDDLGRVKLTFPWLSEEYESWWARVAQLGAGPQRGAVWLPEVNDEVLVAFEHGDTRRPYVVGQLYNGVDTPHLGDGLIDGGSGAVKRRGFVSKQGHRLVFLDDDAKSGVAVMSADDSLKISLNQTATTIKIAADGSVEIRGSQQVTVASDGAVSIQAGTTLELKGNSGVTIDGGPQVGVTGSVIKLN*