ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_17230_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(169..1563)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKW3_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 410.0
  • Bit_score: 582
  • Evalue 3.60e-163
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 410.0
  • Bit_score: 582
  • Evalue 1.00e-163
Transposase IS4 family protein {ECO:0000313|EMBL:ACV80770.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 410.0
  • Bit_score: 582
  • Evalue 5.10e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGCCTTTGTCGTTGTCGAGTGGTCTCGGTCGGGTTGTGTATGATGATGCGGTGACGCGCGCAGACCTGGATGTGTGGGAATCCGAGTTGGCGAGCGTGCTCGCACGGATCCGTCCGCTGTTTTATCGGACGGAGTCGAAGAAACACGCGGAGCAGTATGTGCGGGGATTGTTGTCGCCGATCCAGCGGAAGAATGGCTGGACGATCGCCGAGCATGTTGGTGAGCCAGGGCCGGCGGCGTTGCAGCGGTTGTTGAACCTGTCTGCGTGGGATGCGGATGCGCTGCTGGTGGTGCACCGTGAGTATGCGATGGAGCATCTGGCTGAGCCGGGTGGGATCCTGGTCGCGGACCCGACGGGTTTTCCGAAGAAGGGCACCAAATCGGTCGGGGTGCAGCGGCAATACTCTGGAACGTTGGGGCGGATTGACAACTGCCAGATTGCCACCTTTCTCGGCTACGTCACCAGCAAGCGGGACCGGGTGCTGCTGGACCGCCGGTTGTACCTGCCGCAGAAGTCCTGGATGGCCGATCCGGCCCGCTGCGCGCAGGCTGGTGTCCCGCCGGACCTGACCTTCACAACCAGGCCACAGCAGGTCCGGGAGATGATCGAGTCCGCGCGTGCGGCGGGGGTGCCGTTCGCCTGGTTCACCGCCGACGAGGAGTTCGGGCAGAACCCCGGTCTGTGCGACTATCTCGAAACGCACCGGATTCCGTATGTGATGGCCGTGCCGAAGACAACCCAATTCACCGACACCAAAACAAACACCGTCCAGGTCGATGAACTCGCCGAGCGGTTACGTCGACATGCGTGGCAACGCCGCGCGTGCGGGATCGGATCGAAAGGATTCCGCGTCTATGACTGGGCACTGGTAGACTCCGCGGACCCCGACCACTCCTACCTGATCCGCCGATCCATCGACGATGGTGAACTCGCGTTCTACCACTGCCACAACCCGAACCACGCCGGATTCGGAGAACTCGTGAACGTGGCCGGAGCGCGCTGGCCCATCGAAGAATGCTTCGGATCCAGCAAGAACGAAGTCGGACTCGACAACTACCAAGTCCGCACCTGGAACGCCTGGCACCGACATATCACCCTCGCCATGCTCGCCCACACCTTCCTCGCCATCACCGCACACAAAACCAAAAAAGGGGCTCCCGTCAAGCTCAACCAAACCCGCAGCACCACCCACCCGGCGAACCGGAAACCACACCTCCCATCCATCGACGTCTCATCGCGCTGTCCCTCGCCGAAATCCGCCGACTACTCAACCTCGTCCACCGCGACGAACCCACCATCAACCACGGCCTGCACTGGTCAATCTGGCGCCGGTGGCACCAAACCCAAAGCCGCCGAGCTCACGTCCGACGCCGCCTCCGACTCCAGACCTTAA
PROTEIN sequence
Length: 465
MPLSLSSGLGRVVYDDAVTRADLDVWESELASVLARIRPLFYRTESKKHAEQYVRGLLSPIQRKNGWTIAEHVGEPGPAALQRLLNLSAWDADALLVVHREYAMEHLAEPGGILVADPTGFPKKGTKSVGVQRQYSGTLGRIDNCQIATFLGYVTSKRDRVLLDRRLYLPQKSWMADPARCAQAGVPPDLTFTTRPQQVREMIESARAAGVPFAWFTADEEFGQNPGLCDYLETHRIPYVMAVPKTTQFTDTKTNTVQVDELAERLRRHAWQRRACGIGSKGFRVYDWALVDSADPDHSYLIRRSIDDGELAFYHCHNPNHAGFGELVNVAGARWPIEECFGSSKNEVGLDNYQVRTWNAWHRHITLAMLAHTFLAITAHKTKKGAPVKLNQTRSTTHPANRKPHLPSIDVSSRCPSPKSADYSTSSTATNPPSTTACTGQSGAGGTKPKAAELTSDAASDSRP*