ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_27088_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(763..1443)

Top 3 Functional Annotations

Value Algorithm Source
integrase Tax=Serinicoccus marinus RepID=UPI0003B46E2E similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 225.0
  • Bit_score: 367
  • Evalue 8.90e-99
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EWM64139.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 225.0
  • Bit_score: 411
  • Evalue 5.80e-112
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 225.0
  • Bit_score: 341
  • Evalue 1.50e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACCGTCTCGCGCCGGTTGTCGGTCGTCGTCGGCTTCTACCGGGTCTGCGTCATCGATGCCGTCCTACCGCACTCACCGGCCGACTACGTCCGCCGGCCCGTCGTACCAGCGGAATCGCCCACCCTGGGCCTTGGCCATCTGCAGTTCGAAGCCCTGATCACCACCGCCCGGCTGTCGACCAACCCAACCGACTTCGCTCTGGTTGCCTTGCTCGGCCTACTCGGACTACGGATCTTCGAAGCGTGTGGCGCCAACCTCAGCGACCTTGGCGAGGAACACGGCCACCGCGTCCTACGAGTCCGCAGCAAAGGCGGCAAAGTCGTCCTCGTCCCGCTCCCACCGGCGGTGGCCCGAGCGATCGACCAGACCGCCGACGGCCGCGAGACCGGTCCGATCCTGCGCAACACCCACGGCGCCCGGATGGACCGGCACGCCGCCACCCGCCGGCTCAAACACCTCGCTGGTGCTGCCGGGATCCGGATGCCGAGGATGCACCCGCACATGCTGCGGCATACCTTCGTCACCACCATGCTGGATGCGGGCGTCAGCCTCCGCGACGTACAGATCGCCGCTCGCCACGCCGATCCCCGCACCACCATGCGTTACGACCGCGCCCGCAAGAATCTTGACCGACACCCCAACTACATCCTCGCGGCGTACATGGCCTCCGGGACGTGA
PROTEIN sequence
Length: 227
MTVSRRLSVVVGFYRVCVIDAVLPHSPADYVRRPVVPAESPTLGLGHLQFEALITTARLSTNPTDFALVALLGLLGLRIFEACGANLSDLGEEHGHRVLRVRSKGGKVVLVPLPPAVARAIDQTADGRETGPILRNTHGARMDRHAATRRLKHLAGAAGIRMPRMHPHMLRHTFVTTMLDAGVSLRDVQIAARHADPRTTMRYDRARKNLDRHPNYILAAYMASGT*