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PLM1_60_b1_redo_sep16_scaffold_351_37

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(32518..33456)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 309.0
  • Bit_score: 396
  • Evalue 2.70e-107
DNA-directed RNA polymerase subunit alpha Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7R162_JONDD similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 309.0
  • Bit_score: 396
  • Evalue 1.90e-107
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 309.0
  • Bit_score: 396
  • Evalue 5.40e-108

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Taxonomy

Jonesia denitrificans → Jonesia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGAGATCTCGCGTCCCCGCATCGAGTCGCACCCGCTGGGTGGGCTGGACAACCGTTCGCGCTTCGTCATCGAGCCGCTCGAGCCCGGATTCGGCTACACGCTGGGCAACTCGCTGCGCCGCACGCTGCTGTCGTCCATCCCGGGCGCCGCGGTGACCTCGATCAAGATCGACGGCGTCCTGCACGAGTTCTCGTCCATCCAGGGCGTGAAGGAGGACGTCACCGACATCATCCTCAACGTCAAGGAGCTGCGCCTGCGCAGCGAGACCAACGAGCCCGCAACGATGTTCCTGCGCGCCACCGGTCCGGCCGAGGTGACCGCGGCCGACATCGTGCCGCCGTCCGACCTCGACGTCATCAACCCCGACCTGCACCTGGCCACGCTGAACTCCAAGGCCAAGCTCGAGATGGAGCTGCGCGTCGAGAAGGGCCGCGGCTACCGGCCGGCCGAGCGCAACAAGTCCGCCTCGGACGAGATCGGGCGCATCCCGGTGGACTCGATCTTCTCGCCGGTGCGCCGGGTCAGCTACACGGTCGAGGCCACCCGCTCGGGTGAGATGACCAACTACGACCGGCTGCTCCTCGACGTGGAGACCGACGGGTCGCTGACCCCGGAGGACGCCCTGGCTTCGGCCGGCGGCACCCTGCGCGAGCTGGTCAGCCTGTTCGCGGACCTGACCGGCGGGGGCGAGGGCCTGTCGCTGGGGCCGGCCGAGCAGACCGGCCCGCTGGGCGCCAACCTCGACACCCCGATCGAGGAGCTCGACCTGTCGGTGCGGTCGTACAACTGCCTGAAGCGCGAGGGCATCGTCACCGTGGGCGAGCTCGTCACCAAGTCCGAGGCCGACCTGCTCGACATCCGGAACTTCGGCGCCAAGTCGATCGACGAGGTCCGCGAGAAGCTGCACGAGCTGGGCCTGTCGCTCCGCGAGGAGTAG
PROTEIN sequence
Length: 313
MEISRPRIESHPLGGLDNRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFSSIQGVKEDVTDIILNVKELRLRSETNEPATMFLRATGPAEVTAADIVPPSDLDVINPDLHLATLNSKAKLEMELRVEKGRGYRPAERNKSASDEIGRIPVDSIFSPVRRVSYTVEATRSGEMTNYDRLLLDVETDGSLTPEDALASAGGTLRELVSLFADLTGGGEGLSLGPAEQTGPLGANLDTPIEELDLSVRSYNCLKREGIVTVGELVTKSEADLLDIRNFGAKSIDEVREKLHELGLSLREE*