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PLM1_60_b1_redo_sep16_scaffold_65_11

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 12311..12793

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1L9_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 161.0
  • Bit_score: 258
  • Evalue 2.40e-66
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 161.0
  • Bit_score: 258
  • Evalue 6.90e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ87321.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 161.0
  • Bit_score: 258
  • Evalue 3.40e-66

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGGACTGCAACCCTTCGAAGCGATCGTGGCCGAGTACGGGCCGACGGTGCTGCGCGTATGCCGCGCCGTCCTCGGTCCCACGGCCGCCGACGACGCCTGGTCGGAGACGTTCCTGTCCGCGATGCAGGCCTACCCGGACCTTCGACCGGACAGCAACGTCGAAGCGTGGCTGGTCACGATCGCCCACAGGAAGGCCGTCGACCAGCTCCGCGCCGAGTCCCGACGGGCGGTCCCCACCGACGACCTGCCGGAGAAGCCGAGCAAGGACGGCATGCCCGGCGGCTGGGAGTCCGACCTGTGGGCCGCGCTCAAAGCCCTCCCGCTCAAGCAACGCCAGACCGTGGCCTACCACTACCTCGCCGGCCTGCCGTACGCCGATGTCGCCGCAGTCCTGGGCGGGAGCCCGGACGCGGCGAGGAGAGCGGCCGCCGACGGCATCACCGCACTACGAAAGGCCTACCTGAAAGGAGAAGCCCGATGA
PROTEIN sequence
Length: 161
MGLQPFEAIVAEYGPTVLRVCRAVLGPTAADDAWSETFLSAMQAYPDLRPDSNVEAWLVTIAHRKAVDQLRAESRRAVPTDDLPEKPSKDGMPGGWESDLWAALKALPLKQRQTVAYHYLAGLPYADVAAVLGGSPDAARRAAADGITALRKAYLKGEAR*