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PLM1_60_b1_redo_sep16_scaffold_213_40

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(39407..39592)

Top 3 Functional Annotations

Value Algorithm Source
integrase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D13 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 54.0
  • Bit_score: 77
  • Evalue 5.00e-12
IS30-family transposase similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 55.0
  • Bit_score: 77
  • Evalue 1.40e-12
IS30-family transposase {ECO:0000313|EMBL:AGI66126.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 55.0
  • Bit_score: 77
  • Evalue 7.00e-12

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Taxonomy

Octadecabacter antarcticus → Octadecabacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
TTGACAAACATAGGAGCGTCCAACGGGCTGCTGCGCCAGTACCTGCCCAAAGGAACCGACCTATTCGTGCACTCCGCCGCTGACCTTGCCCGCATCGCCCACAGCCTCAACAACCGGCCCCGCAAGACCCTCGAATACATGACACCATCAGAAAAGCTCGCCGAGCTCCTTGCGCACACCGGTTGA
PROTEIN sequence
Length: 62
LTNIGASNGLLRQYLPKGTDLFVHSAADLARIAHSLNNRPRKTLEYMTPSEKLAELLAHTG*