ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_14159_3

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2447..3334)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 25 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAR5_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 185.0
  • Bit_score: 94
  • Evalue 1.50e-16
family 25 glycoside hydrolase similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 185.0
  • Bit_score: 94
  • Evalue 4.10e-17
Glycoside hydrolase family 25 {ECO:0000313|EMBL:ADG88282.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 185.0
  • Bit_score: 94
  • Evalue 2.00e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCACGGTTTGGTCCAGACATCTCCGACCACCAGGACGGGGTCGACCTCGCCCGCGCCAAGGGGCATGTCGACTTCGTGTTCCTGAAGGCGGCGGAGGGCAGGACAATCGTCCACAAGACGTTCAAGCCACGGTGGCGGCAGCTCGCGGATCTCGGCATTCCTCGCGGCGCCTACCACTACGCGATCCCGAGCAACCCCCCGGCGGCGGACGCAGCCCACTTCGTCTCGGTCGTCCGGCAGAACGGGTTTCGAGCGGGGGACGCGGCGATCCTCGACATGGAGGACCAGAAATTCTCCAAGGGGATGTCGGCGCAGGCACTGCGTGCGTGGGTCGACCGCTTTGTCGCCGACGTTCGCCAGGCCCTGCCGGTCCGGGACGTGGTGTTCTACACCGGCATCCCGTTCTGGAATGAGCGGATGGGACACCCGCCCGTGCTCCCGGCCGGCTGCATCGGATGGCTTTGCCGCTACCGCAAGGAGGGTCCCTACGGAGGGGGGCTCGGACGGCCGGCGGCATGGCCAGATCCGCCAGACATCTGGCAGTTCACCGACGGGACGTCTGGGCGGGTCCGGAACATCCCGGGGATCGGCGAGGTCGACTGCAGCGAGATGACCGAGGCGTGCTTCCGGCGCCTGTTCGAGGAAGGAGACCGGCCCCCGGTCGAGGGAGGAGACTGGTTCGACATGGCCACCAAGGAAGAGCTTGCCGAGGTCGTGCGGCAGGAGGTCAAGAAGCTCGTGCAGGACATCTACCCGCTGCTCGCCCGTGGAGAGCTCGCGGACGGCAGGAAGCTGCCGGACCACTTCCCGCAGTCGCTGGCGGCGATCCAGCAGCACATCGATAAGGTCCAGGAGGACACCAAGGCGATCCGGGACAAGGTCTAG
PROTEIN sequence
Length: 296
MPRFGPDISDHQDGVDLARAKGHVDFVFLKAAEGRTIVHKTFKPRWRQLADLGIPRGAYHYAIPSNPPAADAAHFVSVVRQNGFRAGDAAILDMEDQKFSKGMSAQALRAWVDRFVADVRQALPVRDVVFYTGIPFWNERMGHPPVLPAGCIGWLCRYRKEGPYGGGLGRPAAWPDPPDIWQFTDGTSGRVRNIPGIGEVDCSEMTEACFRRLFEEGDRPPVEGGDWFDMATKEELAEVVRQEVKKLVQDIYPLLARGELADGRKLPDHFPQSLAAIQQHIDKVQEDTKAIRDKV*