ggKbase home page

PLM4_90_b2_sep16_scaffold_2945_8

Organism: PLM4_90_b2_sep16_Bathyarchaeota_47_8

near complete RP 25 / 55 MC: 2 BSCG 14 / 51 MC: 1 ASCG 33 / 38 MC: 1
Location: comp(6439..6819)

Top 3 Functional Annotations

Value Algorithm Source
Protein FdhD homolog Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T3Q1_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 115
  • Evalue 2.60e-23
Marine sediment metagenome DNA, contig: S03H2_L07384 {ECO:0000313|EMBL:GAH41284.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 116.0
  • Bit_score: 142
  • Evalue 2.80e-31
Formate dehydrogenase subunit FdhD similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 120.0
  • Bit_score: 115
  • Evalue 7.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 381
ATGCGGAGGAGAACAGTCCCACACCTTGCACTGACCTACAGGAAGACGGGCGGAGTGCATGCGGCTGCATCCTGGACGGGTGACGGGAACCTCGTGGCGATTGCTGAGGATGTGGGTCGTCACAATGCTGTAGACAAGGTGATTGGCATGTCGACAGCCCGCAAGATCAACTTGGAACAGTGCTTTCTCACGTTGACCGGAAGGTTGACAGGAGACATCGTCCTGAAATCGGCGACAGTAAATCTACCATTAGTGGCCTCATTGGCAGCGGCTGTAGATTCGGGAATCGCTCTTGCCCGCAAAGTCAACCTAACCTTAGTCGGATTCGTTCGAGGGAAACGAATGAACGTCTACAGCGTTCCAAGAAGAATCAGATTATAG
PROTEIN sequence
Length: 127
MRRRTVPHLALTYRKTGGVHAAASWTGDGNLVAIAEDVGRHNAVDKVIGMSTARKINLEQCFLTLTGRLTGDIVLKSATVNLPLVASLAAAVDSGIALARKVNLTLVGFVRGKRMNVYSVPRRIRL*