ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_90_b2_sep16_scaffold_5819_4

Organism: PLM4_90_b2_sep16_Bathyarchaeota_47_8

near complete RP 25 / 55 MC: 2 BSCG 14 / 51 MC: 1 ASCG 33 / 38 MC: 1
Location: comp(1649..1885)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase b (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 65.0
  • Bit_score: 100
  • Evalue 1.50e-19
Probable tRNA pseudouridine synthase B Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE8_METFV similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 65.0
  • Bit_score: 100
  • Evalue 5.40e-19
Tax=RBG_13_Bathyarchaeota_46_16b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 78.0
  • Bit_score: 157
  • Evalue 6.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bathyarchaeota_46_16b_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 237
ATGCCTAGAAGTGTTGCTCCATGGGAATCGCAGCGCAAACTGCTGATCAGAGCTGAGGACAGGACCAACCCCAAGTACGGGTGTAGACCCGAAGAAAGGCCGGCTGAAGACTACATACGGCACGGGGTCATCAACCTGGACAAGACTGCTGGTCCAACGAGTCACGAAGTGGCTGCGTGGGTTAAGCGCATCCTCAAGCTTCAGGCGGTCGGTCACGGCGGGACTCTAGAGGCTTGA
PROTEIN sequence
Length: 79
MPRSVAPWESQRKLLIRAEDRTNPKYGCRPEERPAEDYIRHGVINLDKTAGPTSHEVAAWVKRILKLQAVGHGGTLEA*