ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_90_b2_sep16_scaffold_12493_4

Organism: PLM4_90_b2_sep16_Bathyarchaeota_47_8

near complete RP 25 / 55 MC: 2 BSCG 14 / 51 MC: 1 ASCG 33 / 38 MC: 1
Location: comp(1945..2799)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWJ8_SYNGF similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 197.0
  • Bit_score: 96
  • Evalue 2.80e-17
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 197.0
  • Bit_score: 96
  • Evalue 8.00e-18
Polysaccharide deacetylase {ECO:0000313|EMBL:ADY56838.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 197.0
  • Bit_score: 96
  • Evalue 4.00e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophobotulus glycolicus → Syntrophobotulus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 855
GTGACATTGTCTAGTCCTCAAACACTGGTTTTTCTTAGTGTAGACGATTTTCTTTTGAGAAATGAATGGGCTGGCGACGTTCCTGTTGTTTCTTCAAAAGACGTCAAGCCTGAAGAGGATTTTCGAATCTTGGATTTGTTCGAGGATCTTGACATTTCCGCAACACTCTTCATACCAGGGAAGGTGGCTGAACTGTTTCCGAACAAGCTGCAGGAAGTTGCGGATAAAGGCTTTGAAGTTGCTGCCCATGGATACCTGCACGAGAATCTTTCCTTGCTGGAAGAGGTTGAGCGCAAGCAGCGCATATTGGGGGCTGTTGATCTCTTAGAGAAATGTGTAAGGAAAGAAGTTTTGGGTTGGAGATCGCCTGGACTTCACACAGATGACAGTCTATACAAGATTTTGGAAAACACTCATGTCCAATGGTGCAGCAACATAGAGCTGCCATTGCGTTTCAAGCATGTTCCCTTCATGTACAAAGGAAAAATGGAGTTGCCAATAGCGTCAATCGATCTGAAACTGTACGAAAGTGGTTTCAGTCCTGAAAAAGTCTGCGACAAATGGTTATCCATTCTGGAAAGGAACAATGAAATCGTCACGATTGTCATACATCCATGGGTCCAGCTGAAGTGCGATAAGAGGATGGGTAGTCTGAAGCAATTTCTGGAAGCGGCGGCTTCAAGAGAGAATGTGAAGATTTGTGCAGGCTCAGATATCTACAGGCAATATGCTTTGCAGGAACGCTCAATCTACGGTTCGGCGCTTTCTGCGATCGCGAGACTTTGGAAACGTTTTTCAAAACGAGCCCAAACTCCGATTTCAAAGACTCAAAAAGTGCTCTCGCACTACGCATAA
PROTEIN sequence
Length: 285
VTLSSPQTLVFLSVDDFLLRNEWAGDVPVVSSKDVKPEEDFRILDLFEDLDISATLFIPGKVAELFPNKLQEVADKGFEVAAHGYLHENLSLLEEVERKQRILGAVDLLEKCVRKEVLGWRSPGLHTDDSLYKILENTHVQWCSNIELPLRFKHVPFMYKGKMELPIASIDLKLYESGFSPEKVCDKWLSILERNNEIVTIVIHPWVQLKCDKRMGSLKQFLEAAASRENVKICAGSDIYRQYALQERSIYGSALSAIARLWKRFSKRAQTPISKTQKVLSHYA*