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PLM4_90_b2_sep16_scaffold_1711_2

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(511..1293)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 250.0
  • Bit_score: 277
  • Evalue 8.20e-72
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 234.0
  • Bit_score: 271
  • Evalue 1.30e-70
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 252.0
  • Bit_score: 387
  • Evalue 7.90e-105

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGTCCAGGCTCCTCGAAGCAACCGTCCGTGCGGATAAGGCAGCCAAAGAGAGCGCAGAGGCAGCAGTCCGTTCCTCGAAAGCCGCTTTGGAGAATGTCCAGGCTTCTGTTCGTGCAGACAGGGCTGCCGTGGAGAATGTAAAAATTCAATTGGGTTACTGCTCGATTCGTTCATCCATCGATGGCCGAACGGGAAGTCTGATCGTTAAGCAGGGGAACATCATCAAAGCGGATGATATCAACCTCGTCGTCATTAACCAGATCGTTCCCATCGAAGTAGCCTTTTCTATTCCTGAGCAAAATTTATCTGAGATCAAGAAATACATGACTTCTGGAAAAATACAGGTCGAAGCTCTCCTCCCCATGAATGTGGAGCGCCCTGAAAGAGGAGTCATCACCTTTATAGATAATGCTGTGGATAGCAATACCGGTACCATACGGCTCAAAGGAATCTTTGCCAACAAAGAGAAAAAACTCTGGCCGGGGCAATTCGTCAATGTGATCCTGACCCTCACCACAGAACCTAATGTCATCGTGGTTCCATCCCAGGCCATCCAGACCGGACAGGAAGGTCAGTACATCTTTGTGGTCAAACCTGACCTCACGGTGGAATCTCGGTTCGTAGTGGTCGGTAGAACCATCAATAACGAGACCGTTGTTCAAAAAGGACTCCAGGCAGACGAAAAGGTGGTGACCGATGGACAGCTTCGACTCTATCCTGGCGCCCGGGTAGAGATCAAAACTCCAGATTCAGCCACAGCCAATAAGAAAAAAGTTCCATGA
PROTEIN sequence
Length: 261
MSRLLEATVRADKAAKESAEAAVRSSKAALENVQASVRADRAAVENVKIQLGYCSIRSSIDGRTGSLIVKQGNIIKADDINLVVINQIVPIEVAFSIPEQNLSEIKKYMTSGKIQVEALLPMNVERPERGVITFIDNAVDSNTGTIRLKGIFANKEKKLWPGQFVNVILTLTTEPNVIVVPSQAIQTGQEGQYIFVVKPDLTVESRFVVVGRTINNETVVQKGLQADEKVVTDGQLRLYPGARVEIKTPDSATANKKKVP*