ggKbase home page

PLM4_90_b2_sep16_scaffold_1794_2

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 285..584

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 100.0
  • Bit_score: 114
  • Evalue 6.00e-23
histone-like DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 113
  • Evalue 2.20e-23
Tax=RBG_13_Deltaproteobacteria_51_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 99.0
  • Bit_score: 154
  • Evalue 4.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_51_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCAAAAAAGCCGCTTACGAAGTCCCAGGTTGTATCCCACTTTGCTGAGAAATTCGAAGTGTCAAAGAAGACCGCTGTGGCGATTGTTGAAGAGGTCGCTGCACTGGCAATCGCCGAGACGAAGAAGGCCGGTTCTTTCACCCTTCCAGGCGTCGGCAAACTTGTCCTTTCCAGACGTAAGGCACGCAAAGGTTTCAACCCTGCAACGGGCGAGCGGATTAACATCCCTGCTAAGACCGTGGTGAAGATGCGCCTCGCCAAGGCTTGCAAGGAAGCAATCGTTCCCCCGAAAAAATAA
PROTEIN sequence
Length: 100
MAKKPLTKSQVVSHFAEKFEVSKKTAVAIVEEVAALAIAETKKAGSFTLPGVGKLVLSRRKARKGFNPATGERINIPAKTVVKMRLAKACKEAIVPPKK*