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PLM4_90_b2_sep16_scaffold_1829_3

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1054..1668)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU56_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 163
  • Evalue 1.40e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 163
  • Evalue 3.80e-38
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 197.0
  • Bit_score: 328
  • Evalue 5.80e-87

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Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGGACCGTGAGGAAACCCAGCTGATCTCCAGATGTCAACAAGGAGATCAAGACGCATTGAAGGAGATCTTCGATAAATATCATAAGAAGGTCTATCGGATTGCCTACGGAGTGGTAAGGCATAGGGAGGAAGCCCTTGATATTGTTCAGGAAGTCTTTATCAAACTATTTCGTTCGATTAAAAATTTTAAAGGGAAGTCCCGTTTCTATACTTATCTTTATCGAATGGTGATGAATACGGCGATTGACCACGCAAGAAAGACAGGGAAACAGTTTATTTCAAGTCTCGATGAAGAGGGAAGTTTCGAACCCTCCGACGAAGTTGAAAGGGGGCCGGAAAAGATTCTTCTCCAAAAGGAGTTGGAAGAGAGGGTGAAGGGAGCGATGGAGAAACTTCCAGCTGAACAGAGGGCAGCGCTCATCTTCAGGGATGTGGAAGGTCTTTCCTACCAGGAGATGTCAGAAGCAATGGGATGTTCTATCGGGACGGTGATGTCCCGTCTTCATTATGGCAGAAAAAGAATTCAGGAGTTGTTGAAAGATTATGTGAGGCCCTATGGCCAAAGTGGCGGTTCCTCCAATGTTCCAAAGGGGAGGATTCCACCGAAGCTTTAG
PROTEIN sequence
Length: 205
VDREETQLISRCQQGDQDALKEIFDKYHKKVYRIAYGVVRHREEALDIVQEVFIKLFRSIKNFKGKSRFYTYLYRMVMNTAIDHARKTGKQFISSLDEEGSFEPSDEVERGPEKILLQKELEERVKGAMEKLPAEQRAALIFRDVEGLSYQEMSEAMGCSIGTVMSRLHYGRKRIQELLKDYVRPYGQSGGSSNVPKGRIPPKL*