ggKbase home page

PLM4_90_b2_sep16_scaffold_10528_3

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(2249..2524)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein bin=GWC2_Planctomycete_KSU_39_26 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 90.0
  • Bit_score: 146
  • Evalue 1.30e-32
Xre family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 91.0
  • Bit_score: 134
  • Evalue 1.10e-29
Tax=RBG_16_Deltaproteobacteria_49_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 156
  • Evalue 1.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_49_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGAGTGACTTAGGGAAATATATTAGGGAGAGAAAAAAGAGGGATAAAGAATTTGCCAGAGGATTTGAAGAGGGGTATGAAGAATTCAAAATTGGTGTAATGCTTCGTCAAGCCCGTGAAACAGCGGGGTTAACACAGGAAGAACTGGCACGCCGACTTAAAACGAAGAAAACTGCAATCTCAAGGATTGAAAATCATGCAGAAGATATCAAGCTATCAACCCTGAAACGTGTAGCTGGTGCACTGGGAAAGCGTCTTCAAGTCAGTATCGGTTGA
PROTEIN sequence
Length: 92
MSDLGKYIRERKKRDKEFARGFEEGYEEFKIGVMLRQARETAGLTQEELARRLKTKKTAISRIENHAEDIKLSTLKRVAGALGKRLQVSIG*