ggKbase home page

PLM4_90_b2_sep16_scaffold_27625_1

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1..480

Top 3 Functional Annotations

Value Algorithm Source
Dual-specificity RNA methyltransferase RlmN bin=GWC2_Nitrospirae_57_13 species=Micavibrio aeruginosavorus genus=Micavibrio taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 159.0
  • Bit_score: 192
  • Evalue 2.80e-46
50S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 159.0
  • Bit_score: 183
  • Evalue 3.60e-44
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 157.0
  • Bit_score: 270
  • Evalue 8.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
TCGTCAAGAAGGATCACCCTCTCAACGGTCGGTCTTCTTCCAGAGCTGGAACAACTGGCGAAAGAAAAGATTTCATTTCGTCTGGCCATTTCACTCAATGCTTCGGATGAAGAGACCCGAAGTCAATTGATGCCTGTCAATCGCCGTTACCCCTTAAATAAGATCTTGTCGTTATGCAAAAATTTTCCCATCAAGCCAAGAACCCGGATCACCTTTGAATATGTCCTGTTAGAGGGAGAAAATGACTCTCCCCAGGATGCGAAGAGATTATTAAAGATATTAAGGGGAATTCCTTCTAAGGTCAATCTCATCCCACTTAATGAAGCCCCTGGAATCCCTTTTAAAAGACCTTCGGAAGAGAAGGTCAGACAGTTTCAAGAAATTTTAATGGGGGGCGGACTCACTGCGATTGTCCGAACTAGTAAAGGAGCCGAGATTTCAGCTGCCTGTGGTCAACTCCAGGGAAAAGTTCAGAGTTAG
PROTEIN sequence
Length: 160
SSRRITLSTVGLLPELEQLAKEKISFRLAISLNASDEETRSQLMPVNRRYPLNKILSLCKNFPIKPRTRITFEYVLLEGENDSPQDAKRLLKILRGIPSKVNLIPLNEAPGIPFKRPSEEKVRQFQEILMGGGLTAIVRTSKGAEISAACGQLQGKVQS*