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PLM4_90_coex_sep16_scaffold_446_20

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 18341..20164

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 580.0
  • Bit_score: 644
  • Evalue 7.80e-182
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 580.0
  • Bit_score: 644
  • Evalue 2.20e-182
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 607.0
  • Bit_score: 1096
  • Evalue 0.0

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Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGAAGCGTAAGGATGTCCATATCGGATCCAAGGGCGGCCCGAATCGCCCTGCAGATGATGGGACGGCAATAAAAGGCAAGGATATTTATATCCGTGTGCTGAAGTTCGTCCGGCCCTATTGGCCCAGGCTCCTCGCGGCCATGGCCTTTATGGGAGTGGTGTCGGCCATTACTGCCGTCTTCGCCCTGCTCACCAAAAATGTCCTGGATGACATCTTCATTAATAAAGACAAATTCATGTTGACCGTCATCCCTCTGGCGTTTATATGCCTCGGGGTAATCAAGGGGTTCTTCGGCTTTGGGGAGGGTTACCTGATGAATTATGTGGGTCAGCGAGTAGTGGCGAATATACGATATCAGCTCTATAGCCATTTGCAAACCCTCTCCCTCTCCTTTTTTGATCGGACCCCGACGGGTGTGTTGATGGCCCGCATCACCAACGATGTAAACTCTATCCAGGGTGCCGTCTCCGATGCTGTAACCGGTATGGTGAAGGATCTCTTTACCGCCGTCGGCTTGATCTGTGTCATTTTCTACCGCGACTGGCAGCTTGCTCTTGTGGCCATTTTTGTCTTTCCCTTAGCGGCCTTGCCTTTTATTCAGTTCAGCAGAAAACTGCGCAAGATCAGCAAGAGGACCTTGGAGACTATGGCCTACATCAGTACGTTTCTCCAGGAGACCATTTTCGGCCACCGTATCGTCAAGGCCTTTAATATGGAGGCATATGAGAACAGGCGTTTCGGCGATGCCAACGAGAAATACTTCAAGTATCTCATGAAACGGGTGAAGATAAGGTCCCTCTCCAACCCGGTGATGGAGTGGATGGCGTATCTCGGCATTGGTTCCTTTGTGTGGGTCGGCGGGTATAGGGTCATCAGCGGGGGAATGTCCGTGGGGGACTTTTTCTCCTTCATGACGGCCATGGCCATGCTCTACGATCCCCTGAGGGGATTGAGCAAGGTCAACCTCGTCATCCAGGAGGGGATAGTGGCTGCCCGCCGGGTTTTTGCAATCTTAGACCTCAAGCCGGAGGTAGCCGATGCGCCCGATGCCCAGACCCTGCCCGCCTTTTCCCGCGAGATCGAGTACCACGATGTCTCCTTCCGCTATGCCGATGAGATGGTCCTGAAGCGCATCAGCTTCGCGGTGAAGCGCGGCGAGAAGGTGGCGCTAGTAGGCTCCAGTGGGGCAGGGAAGACCACCTTGGTAAACATTCTGCCGAGGTTTTACGATGTGGCCAAAGGAACGGTTACGATCGATGGGATGGATATTCGTAAGGCGACCTTGCAGTCCCTGCGCGAGCAGATAGGCGTGGTGGGCCAGCAGACCCTGTTGTTCAACGACACCGTGCGGAACAACATCGCCTACGGCAGACCGGACATCCCTGAAGCGGAGGTAATCAAGGCAGCCAAGATGGCCGATGCACACCATTTTATCCTCAAACTCCCCCAGGGATATGATACCATAATCGGTGAACAAGGTGTCAGGCTTTCCGGAGGGCAGCGGCAGAGGATCTCTATCGCCAGGGCCTTGCTGAAGAATGCGCCTATCTTGATCCTGGATGAAGCTACCTCCTCGCTGGATACGGAATCGGAGCGCGAGGTGCAGACGGCCTTGGACCGATTGATGGAGAAAAGGACCGTCTTGGTCATTGCCCACCGCCTCTCAACGGTAAGGAATGTCGACAGAATCATCGTCCTGTCCGGGGGAGAGATCATTGAGGAGGGGGTTCATAGAGAACTCATGACCATTGGCGGTGAATACAAAAAGCTCTACGAGCTCCAATTCCAAGATCAGGACCGCCCCTTGCAGGAAGTGGCATAA
PROTEIN sequence
Length: 608
MKRKDVHIGSKGGPNRPADDGTAIKGKDIYIRVLKFVRPYWPRLLAAMAFMGVVSAITAVFALLTKNVLDDIFINKDKFMLTVIPLAFICLGVIKGFFGFGEGYLMNYVGQRVVANIRYQLYSHLQTLSLSFFDRTPTGVLMARITNDVNSIQGAVSDAVTGMVKDLFTAVGLICVIFYRDWQLALVAIFVFPLAALPFIQFSRKLRKISKRTLETMAYISTFLQETIFGHRIVKAFNMEAYENRRFGDANEKYFKYLMKRVKIRSLSNPVMEWMAYLGIGSFVWVGGYRVISGGMSVGDFFSFMTAMAMLYDPLRGLSKVNLVIQEGIVAARRVFAILDLKPEVADAPDAQTLPAFSREIEYHDVSFRYADEMVLKRISFAVKRGEKVALVGSSGAGKTTLVNILPRFYDVAKGTVTIDGMDIRKATLQSLREQIGVVGQQTLLFNDTVRNNIAYGRPDIPEAEVIKAAKMADAHHFILKLPQGYDTIIGEQGVRLSGGQRQRISIARALLKNAPILILDEATSSLDTESEREVQTALDRLMEKRTVLVIAHRLSTVRNVDRIIVLSGGEIIEEGVHRELMTIGGEYKKLYELQFQDQDRPLQEVA*