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PLM4_90_coex_sep16_scaffold_6526_1

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 571..1116

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWC2_Nitrospirae-rel_56_14 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 181.0
  • Bit_score: 170
  • Evalue 1.30e-39
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 178.0
  • Bit_score: 131
  • Evalue 1.40e-28
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 181.0
  • Bit_score: 311
  • Evalue 5.00e-82

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Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGGAGGCGATGATCGCTTAGTAGAGAGGGCTCGGGCTGGTGATGAGGAAGCCTTTGAGGACCTGGTCAGGAGATATGAAAAGCCGATCTATTATCTCGCCTTGCGCTCTGTGCGGGAAGAGCAGGCGGCGGCTGACCTGGCACAAACCACCTTTCTGAAGGCGTTTCAAGGCCTGCACGGCTTTCGCGGGCAAGCGAGTTTCAAGACGTGGCTCTATCGCATTGCGATCAACCTGTGTAAGAATTACCTGCGTGACTATGGAAAGAAGAAATTCGACAGCCTGGGCGAGATGGACCCCCCCTCCACTGCCAACCCCCTGCGCGAGCTTATCGAGCATGAGAGTCAGGCGCTGCTTGCCCGGGCCTGGGCAAGACTCCCGGAGAAGCAACGAATGACCGTCGTGCTGAAGGTGCAGGAGGGGATGAAGTACCGGGAGATCGCGGCGGTTATGGGATGTTCCGTCGGGACCATCAAGGCCAATTTCCACCATGCCTGTACCAGATTAAAGGCAATGCTTCAGGAGGGAAGAGATGAGATGCCATAG
PROTEIN sequence
Length: 182
MGGDDRLVERARAGDEEAFEDLVRRYEKPIYYLALRSVREEQAAADLAQTTFLKAFQGLHGFRGQASFKTWLYRIAINLCKNYLRDYGKKKFDSLGEMDPPSTANPLRELIEHESQALLARAWARLPEKQRMTVVLKVQEGMKYREIAAVMGCSVGTIKANFHHACTRLKAMLQEGRDEMP*