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PLM4_5_b1_sep16_scaffold_247_9

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 7999..12207

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 1400.0
  • Bit_score: 2242
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Sulfuricella denitrificans skB26 RepID=S6AF34_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 1400.0
  • Bit_score: 2242
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 1402.0
  • Bit_score: 2475
  • Evalue 0.0

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Taxonomy

R_Betaproteobacteria_66_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4209
ATGAAAGCACTACTCGAGCTGTTCAAGCAGGTCCAGCAGGACGAGGACTTCGAAGCCATCAAGATCGGGCTCGCCTCGCCCGAGAAGATCCGCTCGTGGTCCTACGGCGAGGTGAAGAAGCCCGAGACCATCAACTACCGTACCTTCAAGCCGGAGCGGGATGGCCTGTTCTGCGCCAAGATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGCGGCGTGATCTGCGAGAAATGCGGCGTCGAGGTGACGCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCGAGCCCGGTGGCGCACATCTGGTTCCTCAAGTCGCTGCCCTCGCGCCTCGGCCTGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAGGCGTATGTCGTGACCGACCCGGGCCTCACGCCGCTCAAGCGCTGCCAGTTGCTGACCGAGGATGATTACCTCGCCAAGGTCGAGGAGTTCGGCGACGACTTTGCCGCCAGCATGGGCGCCGAAGGCATCCGCGCCCTGCTGCGCGCGATCGACATCAACCGCGACCTCGAGCAGCTGAGGAAAGACCTCGAGGCGACGTCCTCCGATGCCAAGATCAAGAAGCTCGCGAAGCGGCTGAAGGTGCTCGAGGGCTTCAAATCCTCGAACATCAAGCCCGACTGGATGATCATGGAGGTGCTGCCGGTGCTGCCGCCGGAGCTGCGTCCTCTGGTGCCGCTGGACGGCGGCCGCTTCGCCACCTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGCAACAACCGCCTCAAGCGCCTGCTGGAGCTCAAGGCGCCCGAGATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAGGCGGTGGACTCGCTGCTCGACAACGGCCGCCGCGGCAAGGCGATGACCGGCGCCAACAAGCGCCCGCTCAAGTCGCTCGCCGACATGATCAAGGGCAAGGGCGGGCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGATTACTCGGGCCGCTCGGTGATCGTGGTCGGGCCGCAGTTGAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTGGAACTGTTCAAGCCGTTCATCTTCAACAAGCTGGAGCTGCTCGGCCTGGCCACCACCATCAAGGCTGCCAAGCGCCTGGTGGAGCAGGAAGTGCCCGAGGTGTGGGACATCCTGGAAGAGGTGATCCGCGAGCACCCGGTGATGCTCAATCGCGCGCCCACGCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTGCACGTGCCGCTGTCGCTGGAAGCGCAGATGGAAGCGCGCACGCTGATGCTCGCGTCGAACAACGTGCTCTCGCCAGCCAATGGCGAGCCGATCATCGTGCCCTCGCAGGACATCGTGCTGGGCCTTTACTACGCCACGCGCGAGCGCATCGGCGCCAAGGGAGAGGGCATGAGCTTCGCCGACCTGGCCGAAGTGTCGCGCGCCTATGAAACGCGCAACGTTGACCTGGGCGCCAAGGTCTGGGTGCGCATCAAGGAGCACGACCTGACGCCCGAGGGCGCGAAGGTGGAGCGCATCAGGCGCTACGAGACCACCATCGGCCGCGCGCTGCTCTCCGAGATCCTGCCCGCGGGACTGACTTTCGAGCTGCTGAACAAGCCGCTGAAGAAGAAGGAAATCTCGAAGCTGATCAACATCGGCTTTCGCCGCTGCGGACTGCGCGAGACGGTGATCTTCGCCGACAAGCTGATGCAGGCCGGCTTCACCATGGCCACGCGCGGCGGCATTTCCTTCGGCGTGAACGACATGCGCATCCCGACCGCCAAGCAGGAGCTGATCGCGGTGGCCGAGGCCGAGGTGAAGGAGATCGAGTCGCAATACACCTCCGGCCTGGTCACGGTGGGCGAACGCTACAACAAGGTGGTGGACATCTGGTCGCGCTGCGGCGAGCAGGTCGGCAAGGTGATGATGGAGCAGCTCGGCACCGAGGAGACCATCGACCGCCACGGCAAGAAGGTGCGCCAGGAGGCGTTCAACTCGATCTACATGATGGCCGACTCGGGCGCGCGCGGTTCCGCCGCCCAGATCCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCGATCATCGAGACGCCGATCACGGCCAATTTCCGCGAAGGCCTGAACGTCCTGCAGTACTTCATTTCGACCCACGGCGCGCGCAAGGGCCTGGCCGACACGGCGCTGAAGACCGCCAACTCGGGCTACCTGACGCGGCGCCTGGTCGACGTGACGCAGGACCTGGTGGTGACCGAAGACGATTGCGGCACGCAGAACGGCATCGTCATGCGCGCCCTGGTCGAAGGCGGCGAAGTGGTCGAGGCCCTGCGCGAGCGGATCCTCGGCCGCGTGCTGGCCGTGGACCTGATCAACCCGGAGACCCAGGACGTGCTCTCCACGGCGGGTTCGCTGGTGGACGAGGACGCGGTGGACAGCATCGACAACGTCGGCATCGACGAGGTCAAGGTGCGCACGCCGCTCACCTGCGACACGCGCTGGGGCGTGTGCGCCAAGTGCTACGGGCGCGACCTCGGCCGCGGCTCGATCGTCAACGTCGGCGAGGCGATCGGCGTGATCGCCGCGCAGTCGATCGGCGAACCGGGCACGCAGCTGACGATGCGCACGTTCCACATCGGCGGCGCCGCCAGCCGTACCGCGGTGCAGAGCCACGTCGAGGCGAAGTCCGCCGGCACGGTGCGCTTCACCCCGACCATGCGCTACGTCACCAACGCCAAGGGGGACAAGGTGGTCATCTCGCGTTCCGGCGAGGCGACCATCGTGGACGACAACCACCGCGAGCGCGAACGCCACAAGGTGCCTTACGGCGCGACGCTGCAGGTGGCCGACGGCGACGCCATCCGGGCGGGCAAGACGGTCGCCGCCTGGGATCCGCACCACCGGCCCATCATCACCGAGTACGCAGGTGCGGTGAGGTTCGAGCACGTCGAGGAAGGCGTGACGGTGGCCAAGCAGATCGACGACGTCACCGGCCTGTCGACGCTGGTGGCGATCGATCCCAAGCGCCGCGGCAGCGCCGCGTCCAAGGGCGTGCGCCCCTCGGTCAAGCTGATCAACGAGAAGGGCGACGAAGTGCGCATTGCCGGCACCGACCACGCCGTGAACATCAGCTTCCCGGTGGGCGCGGTGATCGCGGTGCGCGACGGCCAGCAGATGCAGGTGGGCGAAGTGCTGGCGCGCATCCCGCAGGAAACCTCCAAGACGCGCGACATCACGGGCGGCCTGCCGCGCGTGGCCGAGCTGTTCGAGGCGCGCGCGCCCAAGGACAAGGCGATCCTCGCCGAGTACACCGGCACCGTCTCATTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTGATCACCGACCTGGAGGGCACGCAGCACGAGGAGCTGATCCCGAAGGACAAGCACGTGCTGGTGCACGACGGCCAGGTGGTGAACAAGGGCGAGATGATCGTCGACGGCTCGGTGGACCCGCACGACCTGCTGCGCCTGCTCGGGGTGGAGGCGCTCGCGCGCTACATCATCGACGAGGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGGCGCGTGCAGATCGAGGATCCGGGCGAGACCTCGTTCATCCAGGGCGAGCAGGTGGAGCGCGCTGATCTGCTGGAGGAGAACGAAAAGGCCGTCAAGGATGGCAAGAAAGTGGCCGTATTCTCCTACATGCTGCTCGGCATCACCAAGGCGTCGCTGTCGACGGACTCGTTCATCTCCGCGGCTTCGTTCCAGGAGACCACGCGCGTGCTGACCGAAGCCGCGATCATGGGCAAGCGCGACGGGTTGAGGGGCCTGAAGGAAAACGTGATCGTCGGGCGCCTGATCCCGGCGGGCACCGGCATGGCCTACCACAAGATCCGCAAGGACCAGGCCGCCGAGCCGCCGGTGATCGACCTGCCGGTGGTGCTCGAGGAAGCGCCGGCCGCCGCTACGGAGGTTGCTGCCGCCAGCGGCGGCTGA
PROTEIN sequence
Length: 1403
MKALLELFKQVQQDEDFEAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGLTPLKRCQLLTEDDYLAKVEEFGDDFAASMGAEGIRALLRAIDINRDLEQLRKDLEATSSDAKIKKLAKRLKVLEGFKSSNIKPDWMIMEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLELLGLATTIKAAKRLVEQEVPEVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATRERIGAKGEGMSFADLAEVSRAYETRNVDLGAKVWVRIKEHDLTPEGAKVERIRRYETTIGRALLSEILPAGLTFELLNKPLKKKEISKLINIGFRRCGLRETVIFADKLMQAGFTMATRGGISFGVNDMRIPTAKQELIAVAEAEVKEIESQYTSGLVTVGERYNKVVDIWSRCGEQVGKVMMEQLGTEETIDRHGKKVRQEAFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTQNGIVMRALVEGGEVVEALRERILGRVLAVDLINPETQDVLSTAGSLVDEDAVDSIDNVGIDEVKVRTPLTCDTRWGVCAKCYGRDLGRGSIVNVGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVQSHVEAKSAGTVRFTPTMRYVTNAKGDKVVISRSGEATIVDDNHRERERHKVPYGATLQVADGDAIRAGKTVAAWDPHHRPIITEYAGAVRFEHVEEGVTVAKQIDDVTGLSTLVAIDPKRRGSAASKGVRPSVKLINEKGDEVRIAGTDHAVNISFPVGAVIAVRDGQQMQVGEVLARIPQETSKTRDITGGLPRVAELFEARAPKDKAILAEYTGTVSFGKDTKGKQRLVITDLEGTQHEELIPKDKHVLVHDGQVVNKGEMIVDGSVDPHDLLRLLGVEALARYIIDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQIEDPGETSFIQGEQVERADLLEENEKAVKDGKKVAVFSYMLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDGLRGLKENVIVGRLIPAGTGMAYHKIRKDQAAEPPVIDLPVVLEEAPAAATEVAAASGG*