ggKbase home page

PLM4_5_b1_sep16_scaffold_386_1

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 1..465

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 152.0
  • Bit_score: 220
  • Evalue 2.60e-55
3-isopropylmalate dehydratase small subunit Tax=Herbaspirillum sp. JC206 RepID=UPI0002D87147 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 152.0
  • Bit_score: 223
  • Evalue 1.40e-55
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 244
  • Evalue 8.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_19 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
AGGCGACCGCGCAATCCGAATTTCGCGCTGAACGATGCGCGCTACAAGGATGCGAGCATCCTGCTGGCGCGCAAGAACTTCGGCTGCGGCAGCTCGCGCGAGCACGCGCCCTGGGCGCTGCTCGACTACGGCCTGCGCTGCGTGATTGCGCCCTCGTTCGGCGACATCTTCTATAACAACTGTTTCAAGAACGGACTTCTGCCGGTCGTGCTGCAGGAGTCCGAAGTCGATCGCCTGTTCTACGAGTGCGCGTCGTTCCCCGGCCTGCGCCTGACTGTGAACCTGGAGCAGCAGACCGTTGCCACCGACGACCGCTCGCAGGTCCTGCGCTTCGAGGTGGACGCCTTTCGCAAGTACAGTTTGCTGAATGGCCTTGACGAGATCGGACTGACCTTGCGCCACGTGGACAAGATCCGCGCCTTCGAGGCGAAACGGCAAGCCCAGCACCCCTGGCTGTTCCGCTAA
PROTEIN sequence
Length: 155
RRPRNPNFALNDARYKDASILLARKNFGCGSSREHAPWALLDYGLRCVIAPSFGDIFYNNCFKNGLLPVVLQESEVDRLFYECASFPGLRLTVNLEQQTVATDDRSQVLRFEVDAFRKYSLLNGLDEIGLTLRHVDKIRAFEAKRQAQHPWLFR*