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PLM4_5_b1_sep16_scaffold_259_2

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1684..2226)

Top 3 Functional Annotations

Value Algorithm Source
Anhydro-N-acetylmuramyl-tripeptide amidase (AmpD protein) Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P0K1_CHRVO similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 175.0
  • Bit_score: 221
  • Evalue 4.80e-55
ampD; N-acetyl-anhydromuranmyl-L-alanine amidase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 175.0
  • Bit_score: 221
  • Evalue 1.40e-55
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 176.0
  • Bit_score: 243
  • Evalue 1.30e-61

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Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGACTGGGCCCTGACGGGCGGGCCGCGGGCGCGCGCCAAGTCGCCTCGCCGAACTGCGATGCGCGCCCGGCCGGCGCGCGCATCTCGCTGCTGGTGCTGCACTCGATCAGCCTGCCGCCGGGCAAGTTCGGCGGCGACGCGGTCGAGCGGCTGTTCACCAACCGGCTCGACGCCGGGGCGCACCCCTATTTCCGCGACCTCGTGCACCTGCGGGTCTCGGCGCATTTCTTCGTGCGGCGCGACGGCAGCCTGGTGCAGTTCGTGCCGGTGCACCTGCGCGCCTGGCATGCGGGAATGTCCCGCTGGCGCGGGGCCGATCGCTGCAATGATTTCTCCGTCGGCGTGGAGCTGGAAGGGTGCGACGACTCGGCTTTTGCCGGTGCGCAATACCGGCGCGTGATCGCGCTGGCGCGAGCGCTCACTCGCCGGCTGCGCCTGCGCGCGTGCGCCGCGCACAGCGACGTGGCGCCGGAACGCAAGACCGATCCCGGCGCGCGCTTCGACTGGGTGCGATTCCACGCCGGACTGGCGGCCCGCTAA
PROTEIN sequence
Length: 181
MRLGPDGRAAGARQVASPNCDARPAGARISLLVLHSISLPPGKFGGDAVERLFTNRLDAGAHPYFRDLVHLRVSAHFFVRRDGSLVQFVPVHLRAWHAGMSRWRGADRCNDFSVGVELEGCDDSAFAGAQYRRVIALARALTRRLRLRACAAHSDVAPERKTDPGARFDWVRFHAGLAAR*