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PLM4_5_b1_sep16_scaffold_1707_7

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 7829..9058

Top 3 Functional Annotations

Value Algorithm Source
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (Pilus type IV) Tax=Herminiimonas arsenicoxydans RepID=A4G6G4_HERAR similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 405.0
  • Bit_score: 496
  • Evalue 1.40e-137
MSHA biogenesis protein MshG {ECO:0000313|EMBL:KIF82272.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 409.0
  • Bit_score: 511
  • Evalue 5.70e-142
Type IV pilus assembly protein tapC similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 409.0
  • Bit_score: 493
  • Evalue 3.20e-137

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGCCGGCGTTTGCCTACCGCGGGCGCGACGCACGCGGTGGATTGGTCGTTGGCAGGCTGGAGGGCGCAGACACCGGCGCCGTGGCCGATCAGTTGCTGGCCATCGGCGTGACGCCGGTGGAGATATCCCCCGCCGCCGAGAGCGCCGCCATCGCGGCGCCGGAATGGTGGCGGCGGCTCAGCGCGCCGGCGATCAGCGACGTCGACGTGATGCTGTTCTCGCGCCAGATGTACTCGCTGCTCAAGGCCGGGGTGCCGATCATGCGCGCCCTGGCCGGATTGCAGCAATCCGCCAACAACCGCTCCCTTGCCGAGGTCATCGGCGACCTGAGGGCGAGCCTGGACGCCGGGCGCGAACTCTCAGCTGCGATGCGCAGCCACCCGCGCGTGTTCAATGCCTTCTACGTGAGCGTAATCCGTATTGGCGAGACCACCGGCGAGCTCGACCAGTCGTTCAACCGCATGTTCGGGTACATGGAGTTCGAGAAGGACATCCGCGACCGCATCAAGGCCGCGGTACGCTACCCGATCATCGTGCTGGTGGTGATTGTGGCGGCCGTGGCGATCGTGAACTTCTTTGTGATCCCCGCCTTCGCCAAGATTTTCGAGGCGCAGAGAGTGCCGCTGCCGCTGCTCACGCGCCTGCTCATCGGCATGTCGAACTTCTTCATCAACTACTGGCCGCTGATGCTGGCGGCGCTCGTGGTGGCGATCAGCGGGGTGAAGATGTACCTCGCCACCGAGCAGGGACGTTTCTGGTGGGACCGGCACAAGCTGCGCCTGCCGCTCGCCGGCCCGATCATCCTGCGCGCGACGCTGGCGCGCTTCGCGCGCAGCATGGCGCTGGCGGTGCGCGCCGGCGTGCCGATCGTGCAGGCCATGTCGGTGGTCGCCGAGGTGGTGTCCAATTCCTACATGGCGCTGCGCATCCACAGCATGCGCGACGGCATCGAGCGCGGCGAGACGGTTCTGCGCACCGCCACGGCGAGCGGGATCTTCACGCCGGTGGTGCTGGAGATGGTCTCGGTGGGCGAGGAGACCGGCGAGCTGGACGACCTGATGACCGAGGTCGCCGACATGTACGAGCGGGAAGTGGATTACGAGATCAAGAACCTCGCGGCCAACATCGAGCCGATCCTCACCGTGGCCCTCGGCGTGATGGTGCTGATTCTTGCGCTCGGCGTGTTCCTGCCGATGTGGGGCCTCGGCAGCGCGATGTTCAAGAAGTGA
PROTEIN sequence
Length: 410
MPAFAYRGRDARGGLVVGRLEGADTGAVADQLLAIGVTPVEISPAAESAAIAAPEWWRRLSAPAISDVDVMLFSRQMYSLLKAGVPIMRALAGLQQSANNRSLAEVIGDLRASLDAGRELSAAMRSHPRVFNAFYVSVIRIGETTGELDQSFNRMFGYMEFEKDIRDRIKAAVRYPIIVLVVIVAAVAIVNFFVIPAFAKIFEAQRVPLPLLTRLLIGMSNFFINYWPLMLAALVVAISGVKMYLATEQGRFWWDRHKLRLPLAGPIILRATLARFARSMALAVRAGVPIVQAMSVVAEVVSNSYMALRIHSMRDGIERGETVLRTATASGIFTPVVLEMVSVGEETGELDDLMTEVADMYEREVDYEIKNLAANIEPILTVALGVMVLILALGVFLPMWGLGSAMFKK*