ggKbase home page

PLM4_5_b1_sep16_scaffold_641_13

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(11039..12037)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Herbaspirillum seropedicae RepID=UPI0002E8AAA3 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 329.0
  • Bit_score: 478
  • Evalue 3.10e-132
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 331.0
  • Bit_score: 455
  • Evalue 7.90e-126
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU43046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 331.0
  • Bit_score: 455
  • Evalue 3.90e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
TTGGCGGACGCTGAAAAGGTTCTCGTAATCGGCAGCAATTCGTTCTCCGGTGCGAGCTTTATCGATTACCTGCTGCGCCTTGATATACCGGTAATTGGTTGCAGCCGGTCGCCCGAGGCCCATCGCGCATTCTTGCCATACAGGTGGTCGGGTAGAGACGCTCACTTCCAGTTTCATCAGTTTGATCTCAATCACGACCTCGATCCGCTGACGGATTTGATAAATGAGGCGCGGCCGCATTACGTCGTCAACTTCGCGGCGCAAAGCATGGTCGGAGAGAGCTGGAAGAACCCGGATCATTGGTTCATGACGAATGTCGTAAGTGCGGTCAGGCTCCATGAGCGGCTGCGCGCCTGCAATTTCCTCGCGAAATATGTGCATGTCACGACACCCGAGGTCTACGGCAGTACCGACGGATTCATCCGGGAAGACACGCCTTTCAATCCGAGCACGCCTTATGCCGTTTCGCGCGCTGCCGGCGACATGAGTTTGCGAACGTATTTCGACGCTTATAAATTTCCAGTGGTTTTTACCCGAGCAGCAAATGTCTACGGTCCCGGCCAGCAGCTCTATCGGATTATTCCGCGTACGATTCTATACGTGATGCTGGGCCGCAAGCTGCAACTCCATGGTGGCGGTCTTTCGAAGCGGTCTTTTATCCACATGCGGGATGTATCGGATGCGACTTGGCGCATCGCCAAAAGCGCGCCACCCGGCGAGACTTATCACATCTCTACCAATCAAATCGTCACTGTCAGGGAGCTGGTTGCTACCATCGTGACAAAGTTGGGCGCAAAATTTGAAGACTGCGTCGAGATTGTCGGCGAACGCCTGGGCAAGGATGCCGCTTATATGCTCGATAGCACGAAGCTGCGCAAGAACCTGGGTTGGCAGGATAGAATTTCGCTGGACCAGGGGCTCGACGAGTGCATAGCGTGGGTAAAATCCAATTTCGCAGACCTCAAGCGCCAACCTTACGATTACCAGCACAAGCCGTAG
PROTEIN sequence
Length: 333
LADAEKVLVIGSNSFSGASFIDYLLRLDIPVIGCSRSPEAHRAFLPYRWSGRDAHFQFHQFDLNHDLDPLTDLINEARPHYVVNFAAQSMVGESWKNPDHWFMTNVVSAVRLHERLRACNFLAKYVHVTTPEVYGSTDGFIREDTPFNPSTPYAVSRAAGDMSLRTYFDAYKFPVVFTRAANVYGPGQQLYRIIPRTILYVMLGRKLQLHGGGLSKRSFIHMRDVSDATWRIAKSAPPGETYHISTNQIVTVRELVATIVTKLGAKFEDCVEIVGERLGKDAAYMLDSTKLRKNLGWQDRISLDQGLDECIAWVKSNFADLKRQPYDYQHKP*