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PLM4_5_b1_sep16_scaffold_4446_6

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(6015..6275)

Top 3 Functional Annotations

Value Algorithm Source
CpaF pilus assembly protein, ATPase CpaF Tax=Variovorax paradoxus RepID=UPI0003611AAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 86.0
  • Bit_score: 134
  • Evalue 3.70e-29
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:EJL76463.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 132
  • Evalue 1.50e-28
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 86.0
  • Bit_score: 127
  • Evalue 1.30e-27

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATTACGGTCATCGTGCAGGTAAACCGGTTGACGGATGGGCAACGTAAGGTGACGAGCATTCAGGAAATTACCGGCATGGAAGGTGAAATTATCACCATGCAGGAAATTTTCACGTTCAAGCAGACCGGTATGGCGGCGGACGGAAAAGTGAGCGGGCACGTGCAGGCCACCGGCATCCGCCCGAAATTCGCCGATAAGTTGCGCAATCACGGCGTCAACCTCCCGGACGCGATGTTCGACCCGGCCACGCGCTACGAATGA
PROTEIN sequence
Length: 87
ITVIVQVNRLTDGQRKVTSIQEITGMEGEIITMQEIFTFKQTGMAADGKVSGHVQATGIRPKFADKLRNHGVNLPDAMFDPATRYE*