ggKbase home page

PLM4_5_b1_sep16_scaffold_8751_9

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 6853..7233

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide heptosyltransferase I Tax=Thiomonas intermedia (strain K12) RepID=D5WZ02_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 1.20e-23
lipopolysaccharide heptosyltransferase I similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 3.30e-24
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 105.0
  • Bit_score: 122
  • Evalue 2.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCTGATAATGAAAAAGATCCTGCTGATCAAAACATCTTCCCTGGGCGACGTCATCCATGCATTGCCGGCGGTAACTGATTTGACCGTTGCGGGCTTGGCGGCGCAAGTCGACTGGGTCGTCGAAGAGTCGCTGGTGCCGATCGTGAAACTGCATCCGGGTGTGGCCGATGTGATACCCGTGGCGATGCGGCGCTGGCGTCGCGCGTGGTGGCGCCATTCGATTCGCGACGAGATCAGCGCGTGCCGGCGCCACCTGCGGGAGCAGACTTACGACGCAATCATCGACGCGCAGGGCTTGCTCAAACGCGCAGGGCTTGCTCAAGAGTGCCTTGATCGCGCGCGCTGCACGCGGTGTGCGACACGGGCTCGATTTTCATAG
PROTEIN sequence
Length: 127
MLIMKKILLIKTSSLGDVIHALPAVTDLTVAGLAAQVDWVVEESLVPIVKLHPGVADVIPVAMRRWRRAWWRHSIRDEISACRRHLREQTYDAIIDAQGLLKRAGLAQECLDRARCTRCATRARFS*