ggKbase home page

PLM4_5_b1_sep16_scaffold_12177_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 871..1479

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Nitrosospira sp. APG3 RepID=M5DVC8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 190.0
  • Bit_score: 118
  • Evalue 6.50e-24
rpoD; RNA polymerase sigma factor rpoD, Sigma-70 similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 187.0
  • Bit_score: 124
  • Evalue 3.30e-26
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 161
  • Evalue 1.20e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCAAAACCCAAAAAAGCGACGAAGGCGCGCCCGGCAGCGAAGAAAAAGCCGGCAGTCAAAAAGAAAATTATTCTGAAAAAAGCCAAAGCTAAACCCGCCAAAAAAGCCGTCCCGCGCAAAGTCGTCGCCGCCAAGCCGGCGCGCGTTGAAGCTGCGCCGAAACAGCCGAAAGCGTTAACCCCCAAGCAGTTCGCGGCCAAGCTGAAGGCCGACCAGAAGGAAGCCAAGGCAAAGGCCAAAGCCGAGCTGAAGGCCGCCGGCAAAGCCGCGCCCGCGGTTGCGGCAGCAGGCGATGCAAAGCTGCCCAAGACGCGCCAGCGCCTGACCGCCAAAGAGAAGGCGCTCGTCCGCGAATTCGAACGCAAGGAATTGTCGCCGGCCGAAGCTGAAGCGCGCCGCCTGCGCCTGAAGAACCTGATCGTGCTCGGCAAGGAGCGCAGTTACCTGACCTACGCCGAGGTCAACGATCACCTGCCCGACGACATGATGGATGCCGAGCAGATCGAGAACATCATCGCGATGATCAACGACATGGGCGGATCCCGTGCGCATGTACATGCGCGAAATGGGTTCGGTGGAGCTCCTGACACGCGAGGGCGAAATTGA
PROTEIN sequence
Length: 203
MAKPKKATKARPAAKKKPAVKKKIILKKAKAKPAKKAVPRKVVAAKPARVEAAPKQPKALTPKQFAAKLKADQKEAKAKAKAELKAAGKAAPAVAAAGDAKLPKTRQRLTAKEKALVREFERKELSPAEAEARRLRLKNLIVLGKERSYLTYAEVNDHLPDDMMDAEQIENIIAMINDMGGSRAHVHARNGFGGAPDTRGRN*