ggKbase home page

PLM4_5_b1_sep16_scaffold_15643_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(288..3314)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter Tax=Thiobacillus denitrificans RepID=UPI000371FD4E similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 1004.0
  • Bit_score: 1095
  • Evalue 0.0
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 991.0
  • Bit_score: 1082
  • Evalue 0.0
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 1006.0
  • Bit_score: 1299
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3027
CTTTTCTTCGGCTGGCTGGGCTTCCGGACGCTGCCGGTCAACGACCTGCCCAACGTCGACTTCCCGACCATAACCGTAACCGCGTCGCTGCCGGGCGCGAGTCCGGAGATCATGGGCAACACGGTCGCCTTGCCTCTAGAGCGGGAGTTCAGCCGAATTTCCGGCGTCGACGAAATGGTGTCGTCGTCCACCACGGGCAACTCCCGCATCACGATGACGTTCTCATTGCAGCGTGATATCGATTCCGCGGCGCAGGACGTGCAAACCGCAATTTCGCAGGCCATTCGCCGCTTGCCGGGCGAAATGGACCCGCCCACGCTGCGCAAGCTGAATCCCGCCGACGCGCCGGTGCTGATACTCGCGCTCGCCGCGAAAAACGTGCCGATGGCAGAGCTCGATAAGTTCGCCGACTCGCACATTTCACAGCGGTTCTCCACCGTCAACGGCGTCGCGCAGGTTTCGGTGTTCGGCTCGCAAAAGTATGCGGTGCGCTTGTTCGTCGATCCCAACGCACTCGCCAAGCGCGGGCTCGGCCTCGACAAAGTGGTCAGCGCGATTCAAAGTGCCAACTCCAACCTGCCTTCAGGCGCACTGCAAGGCACTGCGCGCAGCTACACGGTCAAATCCGACGGCGGCCTCGACCGCGCAGCGGCCTTCAATCCGCTGATCATCGCCTATAAGGACGGCAAGCCGATTCGCTTGTCGGACATCGGGCGCGCAGAGGACGGCGTGGAAAACGAAAAGGTGCGCAGCTGGTACAACGGCGAACGGGCGCTGATTCTCGCGATCTACCGTCAGCCCGGTTCCAACACAGTGGAAGTCGTCCATCAGTTGCGCGAATTGCTCCCCGAGATCGAAAAAGAAATGCCGGCCGGCGCGACACTGAATGTCGTGGTCGATCGCTCCGAATTCATCCGTGAATCGATCGACGACGTTAATTTCACGTTGATCCTGTCCATTGCGCTGGTAGTTGGCGTCATCCTGGTTTTCCTGCGCAACATCCGCGCCACCCTGGTGACGGCACTCGTGCTGCCAGCTTCCGTGCTGGGCACGTTCGCTGTCATGCACATGCTGGGTTTCAGCCTCAACAACCTGTCGCTGATGGCGATTACGCTGGCGGTGGGCTTCGTGGTCGATGACGCGATCGTGGTGCTGGAAAACATCACGCGGCACATGGAAATGGGCAAGGACCGGATGACGGCATCGCTCGAAGGCGCGCGCGAGATTTCCTCGACCGTGATGACGATGACTATTTCGCTCGTCGTGGTGTTCGTCCCTATCATGTTCATGGAAGGTATGGTCGGGCGCCTGTTTCGCGAGTTCGCGGTGACCGTCGGCGTAGCGGTATTGATATCCGGCATGGTTTCGCTGTCGATTACCCCGATGCTATGCAGCCGGCTGCTCAAACCATCGCATGCGCACGGCCGGGTATTCGATTGGTCCGAGCGCGTATTCGATGGGGCTCGCAATTGGTACGTGACGAGTCTCAAGTGGGTGCTGCGTTTCCCCGGTTTCACTCTGATGGGGTCCCTGGTAGTGCTGCTTTTCATGGGCGTGCTTTACGAGACGGTCCAGAAGGGCTTCATTCCCCGTCAGGATACGGGGGTCATTAACGGCAACACGCGTGCGCGTGAAGGCACCACGTTCACTGATATGGTCAGGAACCAGCAGGCCATCGCAGAGGTCGTGAGCAAGAACGAGAACGTCGAAGGTGTGATGTCGACCGCCGGCCAGGGAGTCGGCGGTACTTTCGGCGACAACATCGGCCGCCTCATCATCCGGTTGAAAGAGCGCGAGCACCGCCCGCTCGGCGCCGATGGCGTGATTCAGCAGCTGCGCCGCGATGTCTCGCACCTGCAGGGCCTGCGCATGTTCCTGTCGAACCCGCCGGCGATACGCATTGGTGGCACCCTCTCGACCAGCGATTACGTATTCACGCTTACCGGCACGGACCTCAAGCAACTTTATGGCCCGGGGCAGGCGCTCGAGGCGCGCCTTAAAACATTGCCGCAACTACAGGACGTGGCGACCAATTTGGAACTGCGCAATCCCGAAATCCAACTCAACATCATGCGTGACCGTGCGGCGGCGCTCGGCGTTTCGTCGCAGCAGATCGAGCTTGCGCTTTTCAACGCATTCGGCGGCCGCAAGGTCTCCACGCTATACGGCGAGTCTGACCAATATTCGGTGCTGTTCGAGGTCGACCGAAAATTTCAAACCGACATCAACGCAATGGAATCGATTTTCATCCAAAGCCCGTCGGGCGCGATGGTCCCGTTGAGCACTGTCGCGCAAATCAAAAGTGGCGTCGGGCCGATTTCGGTCGCCCACCTGGGACAGCTGCCGGCCGTAATGCTTTCTTTCAATCTCGCGCCGGGGGTGTCGGTCGGCGATGCGGTGGCCGCTATCGAAGGCGTCGCGCGTGAAGTGCTGCCGGACAATATTTCCAGCTCATTCACCGGCAGTGCGAAGGCGTTCCAGGAAGCATTTCGTTCCTTGCCGATATTGCTGATGATTACGATCATCCTGATCTACATCATTCTCGCCATACTCTACGAGCACTACGGCTACCCGCTCACGATTCTGACCGCGCTGCCGTTCGCTGGCTTCGGCGCCCTGCTTACGCTGCTGCTCTTCGGCGAGGAGCTGAACATTTTCAGCTTTGTCGGGATCATCCTGCTAATCGGCCTGGTCAAAAAGAACGGGATCATGATGGTCGACTTCGCCCTGCAAGTGCAGCGCGAACAGAACATGCTGCCGAAGGATGCAATCGTCGAGGCGTGCATGGTGCGCTTCCGCCCGATCATGATGACGACGATGGCCGCGATTTTCGCGACCCTGCCGATCGCGATGGGTCTGGGCGCCGGCGCGGAAACGCGCCGCCCGCTCGGTATTGCCGTCGTTGGCGGGCTGGTATTTTCGCAATTCCTTACGCTGTACGTGACACCGGTGTTCTACGTCAGCCTCGACCGTTTTACCGAATTCTTCCGCAAGCGCAAGGCCGTCCCCGCAGTGGAAACGCCCTGA
PROTEIN sequence
Length: 1009
LFFGWLGFRTLPVNDLPNVDFPTITVTASLPGASPEIMGNTVALPLEREFSRISGVDEMVSSSTTGNSRITMTFSLQRDIDSAAQDVQTAISQAIRRLPGEMDPPTLRKLNPADAPVLILALAAKNVPMAELDKFADSHISQRFSTVNGVAQVSVFGSQKYAVRLFVDPNALAKRGLGLDKVVSAIQSANSNLPSGALQGTARSYTVKSDGGLDRAAAFNPLIIAYKDGKPIRLSDIGRAEDGVENEKVRSWYNGERALILAIYRQPGSNTVEVVHQLRELLPEIEKEMPAGATLNVVVDRSEFIRESIDDVNFTLILSIALVVGVILVFLRNIRATLVTALVLPASVLGTFAVMHMLGFSLNNLSLMAITLAVGFVVDDAIVVLENITRHMEMGKDRMTASLEGAREISSTVMTMTISLVVVFVPIMFMEGMVGRLFREFAVTVGVAVLISGMVSLSITPMLCSRLLKPSHAHGRVFDWSERVFDGARNWYVTSLKWVLRFPGFTLMGSLVVLLFMGVLYETVQKGFIPRQDTGVINGNTRAREGTTFTDMVRNQQAIAEVVSKNENVEGVMSTAGQGVGGTFGDNIGRLIIRLKEREHRPLGADGVIQQLRRDVSHLQGLRMFLSNPPAIRIGGTLSTSDYVFTLTGTDLKQLYGPGQALEARLKTLPQLQDVATNLELRNPEIQLNIMRDRAAALGVSSQQIELALFNAFGGRKVSTLYGESDQYSVLFEVDRKFQTDINAMESIFIQSPSGAMVPLSTVAQIKSGVGPISVAHLGQLPAVMLSFNLAPGVSVGDAVAAIEGVAREVLPDNISSSFTGSAKAFQEAFRSLPILLMITIILIYIILAILYEHYGYPLTILTALPFAGFGALLTLLLFGEELNIFSFVGIILLIGLVKKNGIMMVDFALQVQREQNMLPKDAIVEACMVRFRPIMMTTMAAIFATLPIAMGLGAGAETRRPLGIAVVGGLVFSQFLTLYVTPVFYVSLDRFTEFFRKRKAVPAVETP*