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PLM4_5_b1_sep16_scaffold_17355_3

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(1717..2946)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AJW29600.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 409.0
  • Bit_score: 521
  • Evalue 5.50e-145
L-carnitine dehydratase/bile acid-inducible protein F bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 405.0
  • Bit_score: 520
  • Evalue 8.70e-145
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 408.0
  • Bit_score: 501
  • Evalue 1.20e-139

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Taxonomy

Sphingomonas sp. JE1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGCTGCCACTGGATTCTTTGCCGGCGCCGGCTGCGCCGCCGGCCTCAACATTGCTCGCGGGCGTGACGGTCGTCGACCTGACGACGTCGATCGCGGGGCCGTATGCAACGATGCTGCTCGGCGACATGGGCGCGCGCGTGATCAAGGTCGAGCGCCCGGGCGCGGGCGACGATTGCCGCGCGTGGGGCCCGCCGTGGCTCGACGGCGAATCGCTGTGGTTCATGTCGGTCAACCGCAACAAGGAAAGCGTAACCCTCGACTACAGCAACGCCGCGGGCCGCAAAGTCCTGCACGACATGGTCAGGAAGGCCGACGTCGTCATCGTCAACCTCGTCGCGCGCGTGCAGCAAAAGCTCGGCATCGACTACGCAACGTTGAAGGCGATCAAGCCCGATCTCGTGTTCGTGTCGCTGACGGGCTTCGGGCTCACGGGCGCGCGCAAAGATTTCCCATGCTACGACCTGATCGCTGAAGGCTACAGCGGCGTGATGGACCTGACAGGCGAGGCAGAAAGCCCGCCGCAGAAAGTGGGCACGCCCGCCGCCGATCTGATTTCCGGCATGGACGCTGCGATGGCGACGCTCGCCGCACTGTTCGAGCGCGCGAAATCCGGTAAAGGCCATCAAATCGACATCGCGATGGTGGACAGCATGACGCGCTTCATGTCGCCGCGCATCGTGCCGTACCTGGGCGCAGGCGAAATCCCGAAGCGTACCGGCGCCAGGGACAGCGTGATCGCGGTGTATCAGGCGTTCGATACGCAAGACAAGCCGCTGACGCTCGGGCTCGGCAACGATGCGATTTGGAAACGCTTCTGGCAGGCGGTGGGCCAGGCAGAAAAAGGCGAGGCCGCATGTCATGCCAGCAATGCCGACCGGCGCGCCGACCGCGTGGCCATCGTCGACGATATCCAGGCCATCCTGCGCACCAAGCCGCGCGATGAATGGCTGGCGATCTTCATGCAGGCCAAGGTTCCCGCCGGTCCGGTGAACAGCGTCGACGATATCGCGCGCGATCCGGAATTGCTTGCGCGCGGGTTGCTCTATACCGCGGAGACTGGCGGCCGGCGCGTGCCGCAGGTAGGCCTGGGCATCGGCATCGACGGCGCGAATGCAACATACCGCTCGCCGCCGCCGAAGCTTGGCGAACATACGGCATCCATCCTGCGCGACTGGCTGGGTTACGACATGCAGGCGGTTGCGGCGCTGCGTTTGCAAAAACTAATTTAA
PROTEIN sequence
Length: 410
MLPLDSLPAPAAPPASTLLAGVTVVDLTTSIAGPYATMLLGDMGARVIKVERPGAGDDCRAWGPPWLDGESLWFMSVNRNKESVTLDYSNAAGRKVLHDMVRKADVVIVNLVARVQQKLGIDYATLKAIKPDLVFVSLTGFGLTGARKDFPCYDLIAEGYSGVMDLTGEAESPPQKVGTPAADLISGMDAAMATLAALFERAKSGKGHQIDIAMVDSMTRFMSPRIVPYLGAGEIPKRTGARDSVIAVYQAFDTQDKPLTLGLGNDAIWKRFWQAVGQAEKGEAACHASNADRRADRVAIVDDIQAILRTKPRDEWLAIFMQAKVPAGPVNSVDDIARDPELLARGLLYTAETGGRRVPQVGLGIGIDGANATYRSPPPKLGEHTASILRDWLGYDMQAVAALRLQKLI*