ggKbase home page

PLM4_5_b1_sep16_scaffold_27810_5

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(3223..4437)

Top 3 Functional Annotations

Value Algorithm Source
lysN; 2-aminoadipate transaminase (EC:2.6.1.39) similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 399.0
  • Bit_score: 479
  • Evalue 4.80e-133
Transcriptional regulator with HTH domain and aminotransferase domain containing protein Tax=Herbaspirillum sp. CF444 RepID=J3D998_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 399.0
  • Bit_score: 481
  • Evalue 4.40e-133
2-aminoadipate aminotransferase {ECO:0000313|EMBL:KIF83362.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 393.0
  • Bit_score: 494
  • Evalue 1.20e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGACACGGGAAATACGCAAACGCCGGTGTGGAAATTTTCAGCGCGCGCGCAGGCGCTCACCGGCTCGGCGATACGCGATATCGTCAAAAAAATCGGCCAGCGGCCGGACGTGATTTCTTTTGCGGGCGGCTTGCCGTCGCCCGCGACCTTTCCTATCGACGCCATACGCGCGGCGTTCGACGCCGTGCTGACGCGCGAAGGCAAGGCCGCACTCCAGTATTCGGCGACGGACGGCTATGCGCCGCTGCGCGCGTGGATCGCCGGGTCGCTTTCGACGCACGGCGCACGCATCACGCCCGAGCAGGTGCTCATAACCTCGGGCTCGCAGCAGGGGCTCGATCTCCTGGGCAAGGTGCTGGTGAACGAAGGCGACCGCGTATTGGTGGAGACTCCCACGTACGTCGGCGCGCTGCACGCGCTGGGCATTTACGGTCCGCGCTTTGTGTCCGTGCCGATGGATGACGATGGGCTGGTACCCGATGCATTGCCGGAGCTGATGCGCGCGCCTGATCGCGCCGCATTTCTCTACACGATCCCCACATTTCAGAACCCGACGGGCAGGACGCTGGCGCACGAACGCCGCGTGGCGCTCGTCGAGCAGGCGGCGCGCCTGAAACTGCTGGTGGTGGACGACGACCCGTACCGATTGCTCGATCACGCCGGGCGAACTTTCCAGACGCTGCTGTCGATGGACGCGCAGTCGGTCGTGCACCTGGGCTCGTTTTCCAAGATACTCGCACCGGGCATACGCCTGGGCTATATGGTCGCGCCGCCGGAACTCGCGCGTAAAGTCGAACAGGCGAAGCAGGGCGCCGACCTGCATACCTCGACGCTCACGCAAATGGTCGCGCACGAAATCATCAAGGACGGTTTTCTGGACACTCATCTCGTCGCGACGCGGAAAGTGTACGCGGAACAATGCGCGACGATGCTGCAGGCGCTGACGGAGCATTTTCCGCGCGGCGCGACGTGGACGCAACCGACGGGCGGGATGTTCATATGGGCAACTCTGCCGGACGGCCTCGATGCCGCGGTGATGCTGGACGCGGCGCTCGACGCGAACGTGGGCTACGTGCCCGGTGGACCGTTTTTCGCGGAAGCCCCGCGACCAAACACCATGCGCTTGAGTTTCGCTACTGTCGCACCGGACAAAATGCGCGAAGGGATAGCGCGGCTCGGTAAAGTAATCGCCGCCGCGCGCCCGCGCTCGTGA
PROTEIN sequence
Length: 405
MDTGNTQTPVWKFSARAQALTGSAIRDIVKKIGQRPDVISFAGGLPSPATFPIDAIRAAFDAVLTREGKAALQYSATDGYAPLRAWIAGSLSTHGARITPEQVLITSGSQQGLDLLGKVLVNEGDRVLVETPTYVGALHALGIYGPRFVSVPMDDDGLVPDALPELMRAPDRAAFLYTIPTFQNPTGRTLAHERRVALVEQAARLKLLVVDDDPYRLLDHAGRTFQTLLSMDAQSVVHLGSFSKILAPGIRLGYMVAPPELARKVEQAKQGADLHTSTLTQMVAHEIIKDGFLDTHLVATRKVYAEQCATMLQALTEHFPRGATWTQPTGGMFIWATLPDGLDAAVMLDAALDANVGYVPGGPFFAEAPRPNTMRLSFATVAPDKMREGIARLGKVIAAARPRS*