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PLM4_5_b1_sep16_scaffold_556_16

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(17337..18887)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination protein NusA Tax=Rhodovulum sp. PH10 RepID=J6UA71_9RHOB bin=16ft_combo_ws3_JS1 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 503.0
  • Bit_score: 690
  • Evalue 8.10e-196
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 492.0
  • Bit_score: 369
  • Evalue 8.90e-100
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 503.0
  • Bit_score: 690
  • Evalue 1.10e-195

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1551
ATGAATTACGAGATCCTGGATGCTCTGAGCCAGATCACGCGCGAGAAGAGTGTCGATCGCGCGCTTCTGATCGAGACGCTCGAGGCCGGGCTCGCCAGCGCGGTCCGCAAGAAGCACGGCGCCACCGCCGATGTCGAGGTGCGGTTCTCCAACGAGACCGGCCAGATCAAGTGCGCGCTGCGGCGGCACGTGGTCGAGACGGTCGAGGATCCCGCCTTCCAGCTGACGGTCGCCGAGGCGCGCCAGTTCCCGCAGTACCGGGACGCCCAGGTCGGCGACATCCTCGCGTTCCCGCTCCGCATCGAGGAGTTCGGGCGCAACGCGATCCAGACCGCCAAGCAGGTGCTGATCCAGCGCGTGCGCGAGGCGGAGCGCGACAAGGTGTTCAAGGAGTACTCCGACAAGATCGGAATCCTGGTGCGCGGCATCGTCCAGCAGGTCGATCGCGGCAACGTGATCGTCAAGCTCGACCATTCCGAGGGCTTCCTGCCGGCGCGCGAGCAGATTCCCAGGTCGTATCATCGGCAGGGCGACTACGTCCGCGCGGTGGTGATCAACGTCGACAAGTCGGCCAAGGGGCCGCAGGTGATCCTGTCGCGTACCCATCCCGACTTCCTGCGCCGCCTGTTCGAGAGCGAGGTGCCGGAGATCGCCGAGAGCATCGTCGAGATCAAGGCGGTGGCGCGCGAGGCCGGGTTCCGCTCGAAGATCTCCGTCTACTCGACCGATCCGCGCGTCGATGCGGTCGGCTCGTGCGTGGGTCTCAAGGGCTCGCGGGTGCAGAGCATCGTCCGCGAGCTGGGCGGCGAGCGCATCGACATCGTGCCGTGGTCGCAGGATCCCGGCGTGTTCGTGTCGCGCGCGCTGTCGCCGGCCAAGGTGCTGGACGTCAAGGTGCACGAGGCCGAGCGTCGCATGGTGGTGGTGGTGGCGGACGACCAGCTGTCGCTCGCGATCGGCAAGGGCGGTCAGAACGCCCGCCTCGCCGCGCGTCTGACCGGCTGGAAGATCGACCTGATTTCGAGGAGCGAACGGGTCAAGCGCGAAGAGGCGGAGCGCGCCAACCGGATCGAGGTCGAGAAGCTCGACCTCGGCGAAGCGACCACCGAGAAGCTCATCACCGCCGGCATCGAGACCGTTCACGAGCTGATCGCCACGCCGCTCGAGAAGCTGGTCGAGATCCCGGGCATCGGCGAGAAGACCGCAGAGAAGGTGCTGGCGACCGCCCTGGAGTACGTGGCGGCGCATCCGCCGACTCCGGTTGCGCCGGTCGAGGAATTCACTCCGGAGATGGAGGCGGCCGCGATCGACGCGGCGCCGGCTTCGGACGCCGAGACCCCGGAAGCTCTGGAGGCGATGGAAGCCCCCGAAGCGATGGAAGCGCCGGAGGTGATGGAAGCCCCGGTGGCGACGGAAGTCCCGGAAGCGACGGAAGCCCCGGACGCGACAGAAGCCCCGGAGGCAACGGAAGCCCCAGACATCCCGGCGGCCGACGGCGACGAGAACAACTCCACCGCGGGTCCGTCCGGCGGATCGGGAGCAGGAGCCTGA
PROTEIN sequence
Length: 517
MNYEILDALSQITREKSVDRALLIETLEAGLASAVRKKHGATADVEVRFSNETGQIKCALRRHVVETVEDPAFQLTVAEARQFPQYRDAQVGDILAFPLRIEEFGRNAIQTAKQVLIQRVREAERDKVFKEYSDKIGILVRGIVQQVDRGNVIVKLDHSEGFLPAREQIPRSYHRQGDYVRAVVINVDKSAKGPQVILSRTHPDFLRRLFESEVPEIAESIVEIKAVAREAGFRSKISVYSTDPRVDAVGSCVGLKGSRVQSIVRELGGERIDIVPWSQDPGVFVSRALSPAKVLDVKVHEAERRMVVVVADDQLSLAIGKGGQNARLAARLTGWKIDLISRSERVKREEAERANRIEVEKLDLGEATTEKLITAGIETVHELIATPLEKLVEIPGIGEKTAEKVLATALEYVAAHPPTPVAPVEEFTPEMEAAAIDAAPASDAETPEALEAMEAPEAMEAPEVMEAPVATEVPEATEAPDATEAPEATEAPDIPAADGDENNSTAGPSGGSGAGA*