ggKbase home page

PLM4_5_b1_sep16_scaffold_1040_2

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(377..1333)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 319.0
  • Bit_score: 409
  • Evalue 1.70e-111
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 312.0
  • Bit_score: 337
  • Evalue 2.30e-90
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 319.0
  • Bit_score: 409
  • Evalue 2.40e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 957
GTGCCGCAACCCACCACCGTCAAGACCACGCTCGCCCCGCGGATCGGTGTCTCGTACCCGATCAGCGACAAGTCGGCGCTGTTCTTCGCCTACGCGCACCTCTACCAGATGCCGGGCATGAACGACGCATTCGCCAACGCCGACTACCGCGCGCTCCAGAACCTGCAGGCCGCCACCGATCGGTTCGGCGTGATGGGCAACCCCGACATCAAGCCGCAGAAGACCGTGACCTACCAGATCGGCTACAAGCAGGCGCTGAGCGACGTGTTCGGCATGGACCTGACCGCGTTCTACAAGGACATCCGCGACCTGCTGGGAGTCGAGATCGTCACCACCTACAACGATGCGCGGTATGCCCGCTACACGAACGTGGACTTCGGCAGCGTGCTGGGATTCACCGTGATGCTCGATCAGCGTCCGATCGGACCGCTGAGCGCGACCCTCGACTACACGTGGCAGACCGCGCTCGGCAATGCCAGCGACCCCAACGAAACGGCCACCCGCGCCGAGGCGGGCGAGGATGCGCGTCCGCGCCAGGTCCCGTTCAACTGGGATCAGCGCCACACGCTCAACGCGACCGTCACGCTCGCGAAGCCGGCCGTCTACAGCGTGGCCACGGTGGTGCGGGTCGCGAGCGGGCAGCCGTACACGCCCAACACGACCACCGGGTTCGGCTCGGGGCAGGAGCAGAACTCGGGGCGCAAGCCGGCGGGGGTGGTGGTGGACCTGCGCGGCGAGCACAGCCTGTTCAGCGGCAACCGCTCGATGACCGCATTCGCCCGGGTGTTCAACGTGTTCGACACGCGGTACTTCAACGGCCCGGTCTACGAGACCACCGGCAGTCCCTACTACTCGCGCTTCCCGGTCACCGACCAGCGGGCGCTGCTCGATCCGACCCGGCTCTATCCGCCGCGCCGGATCGAGCTCGGACTCACCTTCAGCGGGCGGCAGAAATGA
PROTEIN sequence
Length: 319
VPQPTTVKTTLAPRIGVSYPISDKSALFFAYAHLYQMPGMNDAFANADYRALQNLQAATDRFGVMGNPDIKPQKTVTYQIGYKQALSDVFGMDLTAFYKDIRDLLGVEIVTTYNDARYARYTNVDFGSVLGFTVMLDQRPIGPLSATLDYTWQTALGNASDPNETATRAEAGEDARPRQVPFNWDQRHTLNATVTLAKPAVYSVATVVRVASGQPYTPNTTTGFGSGQEQNSGRKPAGVVVDLRGEHSLFSGNRSMTAFARVFNVFDTRYFNGPVYETTGSPYYSRFPVTDQRALLDPTRLYPPRRIELGLTFSGRQK*