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PLM4_5_b1_sep16_scaffold_1302_7

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 5720..6496

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 238.0
  • Bit_score: 389
  • Evalue 1.50e-105
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 237.0
  • Bit_score: 311
  • Evalue 1.40e-82
Tax=RBG_13_RIF08_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 258.0
  • Bit_score: 322
  • Evalue 5.30e-85

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Taxonomy

RBG_13_RIF08_66_14_curated → RIF8 → Bacteria

Sequences

DNA sequence
Length: 777
GTGACCGACGTGCTCGACGCTCCGGTCGCCGCCACTCCCGCCGAGTCCGCGCCCGGCCCCGGCCTGGTTGCCGAGGGTCTCGAGCGCTACTACGGCAAGTGGCGTGTGGTCAGTGACGTGACGATCGACGTCCGGCGCGGCGAGGTGGTGGGCCTGCTGGGTCCCAACGGGGCCGGCAAGACCACCTCCTTCTACATGATCGTCGGACTGCTCAAGCCGAGCCGCGGGCGGATCCTGCTCGAGGGCAAGGACATCACCGACGAGCCGGTCTTCCGCCGCGCCCGCATGGGGCTCGGCTACCTCGCGCAGGAACCGAGCATCTTCCGCCGCCTGACGGTCAAAGAGAACGTGCTGGCGGTGCTCGAGACCATGACGATGAAGAAGAAGGATCGTGACGAGCGGCTCGCCATGCTGCTCGACGAGCTCAACCTCACGCATCTCGCCGATCGCCAGGCCCACAAGCTGTCGGGCGGCGAGCGGCGCCGGGTCGAGATCACCCGCGCGCTCGCGCGCGAGCCGAAGTTCATGCTGCTCGACGAGCCGTTCGTCGGCATCGATCCGATCGCGGTTTCCGAGATCCAGGACATTGTCGCCCGACTGCGCGCGCGCGGTCTCGGCGTACTGATCACCGACCACAACGTGCGGGAAACACTGCGCATCACCGACCGCGCGTACATCATCTACGACGGACGAATCCTCCTGCAGGGATCCGCGGAACAGCTCGCCAACGACGAGCAGGCGCGCAGGATCTACCTCGGCGAGCGGTTCACTCTGTAA
PROTEIN sequence
Length: 259
VTDVLDAPVAATPAESAPGPGLVAEGLERYYGKWRVVSDVTIDVRRGEVVGLLGPNGAGKTTSFYMIVGLLKPSRGRILLEGKDITDEPVFRRARMGLGYLAQEPSIFRRLTVKENVLAVLETMTMKKKDRDERLAMLLDELNLTHLADRQAHKLSGGERRRVEITRALAREPKFMLLDEPFVGIDPIAVSEIQDIVARLRARGLGVLITDHNVRETLRITDRAYIIYDGRILLQGSAEQLANDEQARRIYLGERFTL*