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PLM4_5_b1_sep16_scaffold_1302_8

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 6516..7952

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 478.0
  • Bit_score: 792
  • Evalue 1.80e-226
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 499.0
  • Bit_score: 426
  • Evalue 7.40e-117
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 478.0
  • Bit_score: 792
  • Evalue 2.60e-226

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1437
ATGGAGATGAAACACTCGCTGCAGCTGACGCAGAAGCCGGCGCTGATCATGACCCAGCGCCTGCAGCAGGCGCTCAAGCTGCTCCAGGTGCCGACGCTCGAGCTCCAGCAGATCCTCAAGCAGGAGATCATGCAGAATCCGATGCTCGAGGAAGTGGACGACGTGGTCGAGAGCGAGGACATCGCGAAGGAGGACTCGGCCGACGAGCAGAACAACGAGGAAGCGGCCGATCCGACCGAGGAAGACGCGATCGACTGGTCGGAGTACATGCAGGACGGCGCGTTCGACCGCGCCTACGTCCCGCAGGGCGAGACCAACCCCGAGTTCCTCGAGAAGGTCCAGGTCACGCGCACTTCGCTGGCCGAGAGCCTGCTCGAACAGATTCACTTCCTCGACCTGACCAAGACCCAGCTCGGGATCGCCGACTTCCTGATCGGCTCGCTCGACGACCGTGGCTACCTGTCGACTCCGCTCGACGAGGTCGCGCAGGCGACCGGCGCGACGCTGCCCGAGATCGAGGCGGTGCTGGGCGTGATCCAGGCACTCGAGCCGATCGGCGTCGGCGCGCGGGATCTGCGCGAATGCCTGCTCATCCAGCTGTCTTCGCACGGTCAGGAGGGCAGCCTGCAGTGGCGGCTGATCCATGACCAGTTCGACAACCTGGTGAACCGCCGGTTCCCCGAGATCGCGCGTCAGCTCAAGTGCACGGTCGAGGAGGTGCAGGCGGCGGCCGACGTGGTCGCGACTCTGAATCCCAAGCCGGGCCTCGAGGTGTCGAGCGAGGAGACCAAGTACGTGGTACCCGATCTGATCGTCGAACGGATCGACGACGAGTACCTGGTGTTGCTCAACGACCGCAATGTGCCGCGGCTGCGGATCTCGTCCGCCTACGAGAGCGTCTTGCGCGAGAAGAAGAACGCGAACCGCGACTCCGACCAGGCCAAGACCCGCGAGTACATCCAGGGCAAGCTGAACTCGGCGCGCTGGCTGATCCAGACCATCGAGCAGCGCCGGCGCACCATGATCAAGGTGATGAACTGCATCATCCGCGAGCAGCGCGAGTTCTTCGACAAGGGCATCGGTTTCCTGCGTCCACTCACGCTGCAGCAGGTGGCGCGGCAGATCGACATGCACGAATCGACTGTGAGTCGCGTGTGCAGCGGCAAGTATGTTCAGACCCCGCGCGGAGTGTTCGAGCTCAAGTTCTTCTTCTCCAGCGGTCTCGAGACCGAGGACGGGGAAGACATCTCGGCGCGCACCGCGAAGGACATCATCAAGACCCTGATCGACGAGGAGGACAAGAAGGAGCCGCTCTCCGACCAGCGCATCGCTGAGCTCCTGCACGAAAAGGGGCTCAAGATTGCGCGGCGTACCGTTGCCAAGTACCGCGAGCAGCTCAACATCCTGCCGGCGCGCTTCCGGCGCCGGGTCGCCTGA
PROTEIN sequence
Length: 479
MEMKHSLQLTQKPALIMTQRLQQALKLLQVPTLELQQILKQEIMQNPMLEEVDDVVESEDIAKEDSADEQNNEEAADPTEEDAIDWSEYMQDGAFDRAYVPQGETNPEFLEKVQVTRTSLAESLLEQIHFLDLTKTQLGIADFLIGSLDDRGYLSTPLDEVAQATGATLPEIEAVLGVIQALEPIGVGARDLRECLLIQLSSHGQEGSLQWRLIHDQFDNLVNRRFPEIARQLKCTVEEVQAAADVVATLNPKPGLEVSSEETKYVVPDLIVERIDDEYLVLLNDRNVPRLRISSAYESVLREKKNANRDSDQAKTREYIQGKLNSARWLIQTIEQRRRTMIKVMNCIIREQREFFDKGIGFLRPLTLQQVARQIDMHESTVSRVCSGKYVQTPRGVFELKFFFSSGLETEDGEDISARTAKDIIKTLIDEEDKKEPLSDQRIAELLHEKGLKIARRTVAKYREQLNILPARFRRRVA*