ggKbase home page

PLM4_5_b1_sep16_scaffold_1619_14

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(10749..11255)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein, PilO Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMQ1_PELPD bin=16ft_combo_ws3_JS1 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 169.0
  • Bit_score: 219
  • Evalue 1.70e-54
Pilus assembly protein PilO similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 164.0
  • Bit_score: 100
  • Evalue 3.30e-19
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 169.0
  • Bit_score: 219
  • Evalue 2.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 507
ATGCCCGATCTGGACCTCAGAAACAAGGCTGTTCTGAAGATCGCGCTCGGCGTCCTGCTCGCGGGCGGCATGTTGGGAGCGTTCTTCTTCACCCACGTGCCGTTCGGATATCAGGAGAAGCGCGACAAGGTGAACGCCCTCAAGGGCGAATACGAGAAGAAGTCGACCGAGCTGGCGCGCGCACGCGCGTCGGTCGCCGACCTGCCGCGGTTCGAAGCCGAGTACGAGCAGTTGCACGACCGCTGGATCCAGGCGGCCGAGCTGCTGCCGGCCGACCGCCAGTACGCGGCGCTGCTCCGCAAGGTGACGCTGGCCGGGGAGCAGACGGGCGTGACGTTCGTGCTGTTCCGGCCCGACGCGCCGCGGCCCGAGACCTACTACACCGAGCTGCCGGTCGATATCTCGGTGAGCGGCGGATATCACCAGGTCGGCGCGTTCCTGGCCGAGCTGTCGAACATGCGACGCATCATCACGGTCGGCAACCTCAAGGTGATGTCGAACACGTGA
PROTEIN sequence
Length: 169
MPDLDLRNKAVLKIALGVLLAGGMLGAFFFTHVPFGYQEKRDKVNALKGEYEKKSTELARARASVADLPRFEAEYEQLHDRWIQAAELLPADRQYAALLRKVTLAGEQTGVTFVLFRPDAPRPETYYTELPVDISVSGGYHQVGAFLAELSNMRRIITVGNLKVMSNT*