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PLM4_5_b1_sep16_scaffold_1902_4

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2538..3785

Top 3 Functional Annotations

Value Algorithm Source
NHL repeat family protein Tax=Rhodococcus sp. JVH1 RepID=J1R1V5_9NOCA bin=16ft_combo_ws3_JS1 species=Rhodococcus sp. JVH1 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 420.0
  • Bit_score: 338
  • Evalue 8.20e-90
PKD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 257.0
  • Bit_score: 95
  • Evalue 2.60e-17
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 420.0
  • Bit_score: 338
  • Evalue 1.10e-89

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1248
ATGCGCACTCGACTGGCGCTTCTAGTCGCGCTGGCCGCGCTGGCCGGCTGCGCGGAGCGCGAGCGCATCAATCCGTTCGACCCCGAGAACGGGACCACGCTCGGCCGTCCGAGCGGCTTCGTCGCGCTCGCCGGTGACGGGGGGATCCGCCTCCAGTGGGAGGCGGTGATCGGCGAAGGGCTGATCGGCTACAAGATCTTCCGCCGCACCTCCCCCGACAGTGCGTTCCGTCCGATCACCGGGACGCTGCCACTCACCACCACGCAGTACATCGATTTCGGCCTGCTGAACGGGCTCGATCACGAGTACCAGATCTTCTTCGTGTTCGACCGTGGTCTCGGCATCGATCCCGCAACCGACATCGCGACGCCCGGCCATCGCGTCCCGTGGATGGTGGACGGCGCTTCCGGCCTGCTCGCGCGTCTCACCGCCGACGGCCGCCACGTCGCGGAGCGGCGCACCTCCCTGGTCAGCCCGAGCGCGGTGACGATCGATTCGCTCTCGCACGTCGTGTGGGCTTCGGACCCGGGTGGACAGGTCAGCGGCCAGGTCGGGTTGCTCGACATGGACGTCGGGATCTTCCTCACCACTCCCGGCTTCGGATCGCCGGGCGAGATTGCGACCCAGCCGCGCGACAGCACCGCGTGGGTGTGCGACGAGGAGTCGGGCAAGGTGATCCACCTCGACTCGCGCGGCGGACGCCCGCTGCCCATCATCCAGGGACTCAACACGCCGACCGGGGTCGCGATCGATCCGGTCGACGGGACGATCTGGGTGTGCGAACGCAACGGCGATCACGTGATCCGCTATGACGAGAACGTAAGCCCGATCTCGACCACCAGCGTGGTCCACCCCTCCCGCGTCGCGATCGATGCGAGCACGCACGAGGCGTGGGTCACCTCCGCCACCCAGCAGGTCGTGCACCGCCTCGATCCCTCCGGCACGGTGGTGGACACCTACACCGGATTCTCGGGACCGGTCGGCATCCAGGTCGATTCGCGGCGTGGACGGATCTGGATCGCCGATCCGGCCGCCAACCGGGTGACGGTGCTGGATCGCGACGGATCGGTCGTCCACCAGATCCCGGGGTTGCCGGGTGCGCGTGCGCTCGCGATCGACTACGAGAGCGGCGAGGCGTGGGTGGCGCTCGCGGGGTCCGGCGAGATCGTGTGGCTGTCGCCGGCCGGCACGGTGATCCGGAGGCTGGGCGGGTTCACGCTGCCACTCGGCGTCGCAATCCGTCCGTAG
PROTEIN sequence
Length: 416
MRTRLALLVALAALAGCAERERINPFDPENGTTLGRPSGFVALAGDGGIRLQWEAVIGEGLIGYKIFRRTSPDSAFRPITGTLPLTTTQYIDFGLLNGLDHEYQIFFVFDRGLGIDPATDIATPGHRVPWMVDGASGLLARLTADGRHVAERRTSLVSPSAVTIDSLSHVVWASDPGGQVSGQVGLLDMDVGIFLTTPGFGSPGEIATQPRDSTAWVCDEESGKVIHLDSRGGRPLPIIQGLNTPTGVAIDPVDGTIWVCERNGDHVIRYDENVSPISTTSVVHPSRVAIDASTHEAWVTSATQQVVHRLDPSGTVVDTYTGFSGPVGIQVDSRRGRIWIADPAANRVTVLDRDGSVVHQIPGLPGARALAIDYESGEAWVALAGSGEIVWLSPAGTVIRRLGGFTLPLGVAIRP*