ggKbase home page

PLM4_5_b1_sep16_scaffold_3938_2

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(175..627)

Top 3 Functional Annotations

Value Algorithm Source
Heat shock protein Hsp20 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML01_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 150.0
  • Bit_score: 153
  • Evalue 1.30e-34
heat shock protein Hsp20 similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 137.0
  • Bit_score: 119
  • Evalue 8.00e-25
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 150.0
  • Bit_score: 153
  • Evalue 1.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 453
ATGACCCTGATTCGCTGGAATCCCCGACCGACCGGGCGGCAGCTGACCCGGTTCCACGGCGAGCTGGACCGTTTCTTCGACGATCTGGTCGGACGCAGCCCGCTCGCGACTGATTTCGTGTCCTCGTTCGTTCCCCCGATCGACCTCGAGGAGTCGGCTGACGGCTTCGTGCTGCGCGCCGATCTTCCGGGGATGAGCCACCAGGACGTCAGCGTGCACCTGTCCGGTGACACGGTGGTCGTCCGCGGGGAGCGCAAGGCGGGCACTCCGTCGAAGGACGCGACCACGCATCGCAGCGAGCGCATCCACGGCACCTTCGAGCGCTCGTTCACCCTCGGCACCCGGGTGCGCGGCGATCAGGTCGCAGCCACCTTCAAGGACGGCGTGCTCGAGATCCGGATTCCGAAGGCCGACGAGTCGCGGGTCCGCGAGATCGAGATCAAGGCCGGCTGA
PROTEIN sequence
Length: 151
MTLIRWNPRPTGRQLTRFHGELDRFFDDLVGRSPLATDFVSSFVPPIDLEESADGFVLRADLPGMSHQDVSVHLSGDTVVVRGERKAGTPSKDATTHRSERIHGTFERSFTLGTRVRGDQVAATFKDGVLEIRIPKADESRVREIEIKAG*