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PLM4_5_b1_sep16_scaffold_5448_3

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1682..3037

Top 3 Functional Annotations

Value Algorithm Source
Peptidase M16 domain-containing protein Tax=Bradyrhizobium RepID=I0GEW8_9BRAD bin=16ft_combo_ws3_JS1 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 313.0
  • Bit_score: 229
  • Evalue 5.80e-57
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 27.9
  • Coverage: 408.0
  • Bit_score: 119
  • Evalue 1.80e-24
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 302.0
  • Bit_score: 227
  • Evalue 3.10e-56

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1356
GTGATCCGCCGTTTCCTGCGGTGTGCCGTGCTCGTCGCGCTTGCCTCCCTGGTTCCCCTGATCGCGCGGGCCGCCGCCCCGGACACGCTCGCCGACGGCACCCGGGTCGAACGCTGGACGCTCGCGAACGGCCTGAAGGTGGTGACGCGCTCGCTTCCCGGTTCCCACGCGGTCGCGATCACGCTCGGATACCGGATCGGCATGGACGACGATCCCGCCGGGCGCGCCGGTTTCGCCCAGCTGCTCGGCGAGCTGGCGTTCACCGCCCCCGCCGGCAACCAGCCCGAGCGTCTGCCCGACGAGCTCGACAGCCAGCGTCCGCTGGGCTGGAGCTACCCGGTGCTGCGCCACCTGACGCTCCTCACCGAGGTCGCAAGCCGCGACCGCTTCCCGGCGGTGCTCGCCCAGGTCGCCGAACGGGCGCGCGGGGTGACTGTCGATGCCGCGCAGCTCGCGACCGCGAAGGCGCGGGTGAAGAAGGAGCTGACGCAGCAGCTGTTCGGGGACCCGACCCCGGTGCTCAATCACCAGATGGGCGAGATCGCGCGCGGCCGCTCGGACGGCGAGATCCTGCGCCACGCCTCGGGCTCCGAGATCGAGCGCGCGACGGTCGCCGAGGTCCAGCAGGAGCTCACGCGCTGGCACTGTCCGGCCAACGCCGTGCTGAGCCTGGTCGGCGATTTCGGCAGGGTCGATCTGCACACGCTGGTCGAGAAGCAGTTCGGCTCGATCCCGGCCGGCGCACCGCGTCCCGAACCGGCGGTCGCGCCGCTCAAGCCGATCACCCGCGCAATGCGTCGCGACGGGGCGCCGATCGGGAGCCTGGGGATCCTCGCGCCCGCGCTCTCGGACAGCAGCCATCCGTCCTTCTACCTCGCATCGATGGTGCTGGGGAGCCTGTGCGAGGGCATGTGGAACCAGAGCTCGCCGGGCGGCGGAACCCGCTATCAGTACGCGCTGGTGGACGAGCCCGAGCTGTTCCGGCTGTTCCCCGACGTGCCGAAGACCGAAGGCGATCCGGGCCGCCTCGTCTACACGCTGCGGCTCGCGACCGACGTGCTGCCGACCCTGGTCATCCCGGACGACGACTTCGAGCAGATGCGGCGCTCGATGACGACGGTGCTCGGGGCCCCGATGCCGCCGGCCCAGCGCCAGGCGGCGAACAGCAACCCGGGGATGCTCCATTCGCTCGCCCGCAGCCAGGCGGCGTGCGAGCTGCGCAAGGGTCCCGAGTTCTGGGGGCGCTACCGGGAGGGGCTCGAACGCGTCCATACCAGCACCGTTTCGCTGTGGAAGGACTGGTTCGAGGCGCCCGCCCACCAGGTGGTTCTGCTGATGACGCCGAAGCCAAAGTGA
PROTEIN sequence
Length: 452
VIRRFLRCAVLVALASLVPLIARAAAPDTLADGTRVERWTLANGLKVVTRSLPGSHAVAITLGYRIGMDDDPAGRAGFAQLLGELAFTAPAGNQPERLPDELDSQRPLGWSYPVLRHLTLLTEVASRDRFPAVLAQVAERARGVTVDAAQLATAKARVKKELTQQLFGDPTPVLNHQMGEIARGRSDGEILRHASGSEIERATVAEVQQELTRWHCPANAVLSLVGDFGRVDLHTLVEKQFGSIPAGAPRPEPAVAPLKPITRAMRRDGAPIGSLGILAPALSDSSHPSFYLASMVLGSLCEGMWNQSSPGGGTRYQYALVDEPELFRLFPDVPKTEGDPGRLVYTLRLATDVLPTLVIPDDDFEQMRRSMTTVLGAPMPPAQRQAANSNPGMLHSLARSQAACELRKGPEFWGRYREGLERVHTSTVSLWKDWFEAPAHQVVLLMTPKPK*