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PLM4_5_b1_sep16_scaffold_8903_10

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 7273..8253

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 321.0
  • Bit_score: 290
  • Evalue 3.30e-76
Pseudouridine synthase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ12_THEM7 bin=16ft_combo_ws3_JS1 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 284.0
  • Bit_score: 357
  • Evalue 1.00e-95
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 284.0
  • Bit_score: 358
  • Evalue 8.40e-96

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 981
ATGAATCGCGAACGGAATCTCACGGTCCCGGAGGCCGGTGACGGCGAACGGCTCGACCGGTGGCTCGCCACCAGCGAAGCCGACCTCACCCGGAATGCGATCCAGGGCATGATCCGCGACGGCCAGATCAAGGTGAACGGGCACCCGGTGCGCGCTTCGCTCAAGCTGCGTCCCGGCGACCGGGTCCTGGTGGTGATGTCCGAGCCGCGCACGCTCGCGCTCGCCCCCGAGGACATTGCGCTCAACATCGTGCACGAGGATGAGCACCTGGTGGTGCTCGACAAGCCGGCCGGCATGGTCGTGCACCCGGGCGCGGGCGTCGATCACGGGACGCTCGTCCATGCGTTGCTCCATCGTTATCCCGAGATCGCCGAAGTGGGCGGGGCGGGGCGACCCGGGATCGTGCACCGGCTCGACCGCGAGACGTCGGGACTGCTGGTGGTGGCGCGCACGCCGCTCGCCTATCGCACGCTGGTCGAGGCGCTCCAGTCGCACACTGTGAAGCGCACGTACGGGGCGCTGGTGTGGGGTGAGCCACCGATGGACGCGGGCGAGATCGAGACCCGGATCGGGCGCCATCCACGCGAGCGGCAGCGCATGGCGGTGCTGAAGCAGGGTGGCAAGGAGGCCCGGACCCATTGGAAGGTTGCGGAACGTTTCGGACCGGCCGCACGGATCGAGATCCAGCTCGAAACCGGCCGCACCCATCAGATTCGTGTCCACATGGCGCACCTGGGATACCCGGTGCTCGGGGACCCGTTGTATGGCGGACGTGTCAAAAACCAGTTGAGCCTTGATACGGCGCAGCGTAGCCTCGCCGCAGATTTGCTCCGGACTCTTCAGCGACAGGCCCTTCACGCTGCAGCTCTGGTCCTGACGCACCCGGTTACCGGTCATCCTCTGGCCTTCGAAACTCAGTGGCCCGGGGACATGCATCAGGCCCTGACGCTGCTGCGGGAGTTCGCGGCGCAGCGTCGCTGA
PROTEIN sequence
Length: 327
MNRERNLTVPEAGDGERLDRWLATSEADLTRNAIQGMIRDGQIKVNGHPVRASLKLRPGDRVLVVMSEPRTLALAPEDIALNIVHEDEHLVVLDKPAGMVVHPGAGVDHGTLVHALLHRYPEIAEVGGAGRPGIVHRLDRETSGLLVVARTPLAYRTLVEALQSHTVKRTYGALVWGEPPMDAGEIETRIGRHPRERQRMAVLKQGGKEARTHWKVAERFGPAARIEIQLETGRTHQIRVHMAHLGYPVLGDPLYGGRVKNQLSLDTAQRSLAADLLRTLQRQALHAAALVLTHPVTGHPLAFETQWPGDMHQALTLLREFAAQRR*