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PLM4_5_b1_sep16_scaffold_10119_2

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 817..1383

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein; K02653 type IV pilus assembly protein PilC bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 303
  • Evalue 1.00e-79
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 187
  • Evalue 2.30e-45
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 303
  • Evalue 1.40e-79

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 567
ATGCCGGTGTTTGTCTGGAGAGGTCGCACACTCGCGGGCGAGGCGCAGTCCGGCGAGCTCGAGGTCGGAAGGCAGGACGAAGCCCTCGATGTGCTGCGCAAACGGAAGATCATGGTCACCTCGCTCCGCAGCAAGGGCGGTGGCTTCACCATGCCGAAGTTCGGCGGGCCCGGGGTCGGCACCAAGGATCTGGCGATCTTCACCCGCCAGTTCGCCACCATGATCTCGGCCGGTCTGCCGCTCGTTCAGTGCCTGGACATTCTCGCCAAGCAGACCAGCAAGCCGTCGTTCGCGCGCGTGATCGCCGAGGTGACGCGCGAGGTCGAGTCGGGCTCGACGCTGGCCGACGCGCTCGGCAAGCACAAGAACGTGTTCGACGACCTGTTCCGCAACATGGTCGCGGCCGGCGAAGCCGGCGGTGTGCTGGACGAGATCCTGATGCGCCTCGCCACCTACATCGAAAAGGCGGACGCCCTCAAGCGCAAGGTCCAGGGCGCGATGATCTACCCGGCGGTGGTGCTCACGGTCGCGATGGGCGGATGCCGGTGCTGGGCGACGTGCTGCTGA
PROTEIN sequence
Length: 189
MPVFVWRGRTLAGEAQSGELEVGRQDEALDVLRKRKIMVTSLRSKGGGFTMPKFGGPGVGTKDLAIFTRQFATMISAGLPLVQCLDILAKQTSKPSFARVIAEVTREVESGSTLADALGKHKNVFDDLFRNMVAAGEAGGVLDEILMRLATYIEKADALKRKVQGAMIYPAVVLTVAMGGCRCWATCC*