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PLM4_5_b1_sep16_scaffold_10119_5

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3517..4908

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 459.0
  • Bit_score: 760
  • Evalue 7.40e-217
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 451.0
  • Bit_score: 453
  • Evalue 7.20e-125
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 459.0
  • Bit_score: 760
  • Evalue 1.00e-216

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1392
ATGCCCACCGAGAAAATCCTGGTCGTCGACGACGAGCAGAGCATGACCCAGTTCCTCAGCATCGTGCTCCGCAAGGAGGGTTACTCGGTCGCGACGGTCAACAATGGCCGTGACGCGCTGGAGAAGGTGAAGACCGAGGGCTTCGACGTGGTCATCACCGACATCAAGATGCCGGGCATGGACGGCATCCAGCTGCTGCACGGGATCAAGAAGCACGACCCGGCGCTGCCGGTCATCATCATGACCGCCTACGCATCGCAGCAGTCGGCGATCGACGCCGTCAACCTCGGCGCGTTCCAGTACCTGATCAAGAACGCCAAGAACGACGAGATCAAGCTGATCGTGCGCAACGCGCTCGAGATGCGGAAAGTCCGGACCGAGAACCTGTTCCTCAAGCGCGAGCTCAAGAAGGGTCACGAGGAGAAGACCATCATCGGCACCTCCGACGAGATGGCGAAGGTGTTCAAGATGGTCGACCGGGTGGCGGAGAGCGACGCCACGATCCTGATCCAGGGCGAGAGCGGCACCGGCAAGGAGCTGATCGCGCGCGAGATCCACTACCGCAGCAAGCGTGCGAACGGCCCGTTCGTCAGCATCAACTGCGGCGCGATCCCGCGCGACCTGCTCGAGAGCAACCTGTTCGGCCACGTGAAGGGCTCGTTCACCGGCGCGGTGCGCGACTCGGCCGGCCTGTTCCAGGTCGCCGAGGGCGGAACGTTCTTCCTCGACGAGATCGGCGACATGCCGCACGCCACCCAGGTCAAGCTGCTGCGTGCGCTCCAGGAGCGCGAGATCATCCCGGTCGGCGGCACCTCGGCGGTCAAGATCGACTGCCGGCTGGTGGCGGCGACCAACGCCGAACTCGAAAAGGAGGTGGCGGAGGGCCGCTTCCGCGCCGACTTGTACTACCGCCTCAACGTGATTCCGATCCGGCTTCCGTCGCTGCGCCAGCGCCGCGAGGACATTCCCCTGCTGGTCGACCACTTCCTCAAGCGCCACGTTTCGAACGGCGTCGAGAAGACGATCAGCAAGGAGGCCCTCGAAACGCTGATGAAGTACGACTGGCCCGGCAACGTGCGCGAGCTGGAGAACGTGATGGAGCGCGTGTTGATCCTCGACGACAGCGGCTGCGTCGAGACCGAGGACCTGCCCGACAACATCCGCTTCGGCCATCAGCAGCGCGGGAGCCTGGTGATCGACTCCCCGACCATGACGCTCGAGGAGCTGGAGAAGGAGTACATCATGAAGGTGCTCCAGCACACCGCCGGGCAGAAGAAGCGGGCGAGCGAGCTGCTCGGAATCAATGCCTCGACGCTCTACCGGAAGCTGATCGCCTACGGCCTCGAGCGCCGCGGCGGTCCGGGGAGCGAAATGGGTGAACACGCCGCCTGA
PROTEIN sequence
Length: 464
MPTEKILVVDDEQSMTQFLSIVLRKEGYSVATVNNGRDALEKVKTEGFDVVITDIKMPGMDGIQLLHGIKKHDPALPVIIMTAYASQQSAIDAVNLGAFQYLIKNAKNDEIKLIVRNALEMRKVRTENLFLKRELKKGHEEKTIIGTSDEMAKVFKMVDRVAESDATILIQGESGTGKELIAREIHYRSKRANGPFVSINCGAIPRDLLESNLFGHVKGSFTGAVRDSAGLFQVAEGGTFFLDEIGDMPHATQVKLLRALQEREIIPVGGTSAVKIDCRLVAATNAELEKEVAEGRFRADLYYRLNVIPIRLPSLRQRREDIPLLVDHFLKRHVSNGVEKTISKEALETLMKYDWPGNVRELENVMERVLILDDSGCVETEDLPDNIRFGHQQRGSLVIDSPTMTLEELEKEYIMKVLQHTAGQKKRASELLGINASTLYRKLIAYGLERRGGPGSEMGEHAA*